KEGG   Phaeodactylum tricornutum: PHATRDRAFT_9231
Entry
PHATRDRAFT_9231   CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PHATRDRAFT_9231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATRDRAFT_9231
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     PHATRDRAFT_9231
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     PHATRDRAFT_9231
SSDB
Motif
Pfam: NOT2_3_5_C
Other DBs
NCBI-GeneID: 7196821
NCBI-ProteinID: XP_002176849
JGI: 9231
UniProt: B7FQB9
LinkDB
Position
1:1791497..1791820
AA seq 107 aa
SSYPSTPSAIFENPGVFEKFGTDCLFFIFYYAQGTYQQYLAARELKKQSWRFHKKYMTWF
QRHEEPKITTDEYEQGTYVYFDYETGWCTRIKTDFRFEYSFLEDTLQ
NT seq 324 nt   +upstreamnt  +downstreamnt
tcgtcctacccatcgacgccttcagcaatctttgagaatcctggtgtatttgaaaagttc
gggacagattgtcttttctttatcttctactatgctcaaggaacataccagcaatatttg
gcagctcgtgagttgaagaaacaaagctggcgcttccacaagaagtacatgacttggttt
cagcggcatgaagaacccaagataactactgacgagtacgagcaagggacgtatgtatac
tttgattacgagacaggctggtgcactcgaatcaagacagactttcgtttcgaatattct
tttttggaagacactctacagtaa

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