Phaeodactylum tricornutum: PHATRDRAFT_9475
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Entry
PHATRDRAFT_9475 CDS
T01075
Symbol
APC3
Name
(RefSeq) hypothetical protein
KO
K03350
anaphase-promoting complex subunit 3
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PHATRDRAFT_9475 (APC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pti01009
]
PHATRDRAFT_9475 (APC3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATRDRAFT_9475 (APC3)
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATRDRAFT_9475 (APC3)
Protein phosphatases and associated proteins [BR:
pti01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
PHATRDRAFT_9475 (APC3)
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
PHATRDRAFT_9475 (APC3)
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
PHATRDRAFT_9475 (APC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_8
TPR_17
TPR_19
TPR_16
TPR_12
TPR_11
TPR_14
TPR_9
TPR_CcmH_CycH
TPR_7
ANAPC3
ARM_TT21_N
HEAT_Nup120
ARM_TT21_C
TPR_Slam
TPR_20
ARM_TT21
TPR_4
TPR_15
TPR_NPHP3
PPTA
ARM_TT21_5th
DUF7017
APP_E2
TPR_21
Motif
Other DBs
NCBI-GeneID:
7196156
NCBI-ProteinID:
XP_002176724
JGI:
9475
UniProt:
B7FPJ5
LinkDB
All DBs
Position
1:1116463..1117473
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AA seq
336 aa
AA seq
DB search
VRHILELLCSMGKAYQCLRSYNCKEALQILQTLPLRQQATAWVLHQEGRAYLELNEFASA
ERCLEQMQIVDPGRMKGLELLSTVYWQVKKEVELAHLAQRVTDWDRESPEAWCVVGNCFS
LQKDHETALTFFSRSLQLNPNFTYTHTLSGYEYMANEDFVKAIACFRQALRTDDKHYNAW
YGLGAIYQRQEKFDLAEYHFGKAVALHPTSSALRCNLGIAQFSNGKAYQALDTLSEAFHL
DPRNPQARFQRASIYMALHRPEEALSELCKVRDVAPREATVHFSLGKVYKKLGRTKEAMK
CFLTAMDLDPKGSQTIKSALEKLEEPDIDEGTGVGF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtcaggcacatcctcgaactactctgtagcatgggcaaagcttaccagtgccttcgtagc
tataactgcaaggaagcgctgcaaattcttcaaacgctacccttgcgacagcaggcaacg
gcatgggtgctgcatcaggaaggacgtgcttatttggagctcaatgagtttgcatcagcc
gaacggtgcttggagcaaatgcaaatcgtagacccgggccgaatgaaaggattggaactt
ctgagtactgtgtattggcaagtaaagaaggaggttgaactagcccacttggcgcagcgt
gttacagattgggatcgtgaatcgcccgaggcctggtgtgttgttggtaactgtttttca
ttgcagaaagatcacgaaaccgcattgacgttcttctctcgttccttgcaacttaaccct
aacttcacctacacccatactctttctggctacgaatacatggcgaacgaagatttcgtg
aaggcaatagcttgcttccgtcaggctttgcggaccgacgacaaacactacaatgcctgg
tatggtctaggagccatttaccaacgccaagaaaagtttgatctggctgagtatcatttt
ggaaaggctgtcgcgcttcatccaactagcagcgctcttcgatgcaaccttggcattgct
caattttccaatggaaaagcgtatcaagctctcgataccttgtcagaagcctttcacctg
gacccacgaaatccccaggcccgctttcaaagagcttccatctatatggcgctgcatcgc
ccggaagaagcgctttcagaattatgcaaggtacgagatgttgcacctcgcgaagcaact
gtacatttctcgctggggaaagtatataagaagttggggcggacgaaagaggctatgaaa
tgctttttaacagctatggatcttgatcctaaagggagccaaaccatcaagtctgctttg
gaaaagttggaggagcctgacatcgacgagggcacaggcgttgggttctga
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