Phaeodactylum tricornutum: PHATRDRAFT_9896
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Entry
PHATRDRAFT_9896 CDS
T01075
Symbol
CCL1
Name
(RefSeq) coumaryl-coa ligase
Organism
pti
Phaeodactylum tricornutum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
VWA_3
Motif
Other DBs
NCBI-GeneID:
7197367
NCBI-ProteinID:
XP_002178079
JGI:
9896
UniProt:
B7FT13
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Position
2:complement(1125598..1127169)
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AA seq
523 aa
AA seq
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MTTSWKPHGGYLDKQVAIVDGTTGAQRTFADHHKTIGGLAAALRDDMDIQETDCVALYCP
NHVDYLPTALAVSLTGAKLTPINPLYTQHELGTILERSRSSVLITHHRLLDVALQSASQS
KFVKHVIVLTDHGEAIPEGTIHLDSLRNHPQTLHCTVAQVHKQTDTHPFLLPYSSGTTGL
PKGVCLSHRNLVANLLQYDEVEGIIFAPDQKVISPLPFFHIYGFLASLLYSAYKGITLVT
TSGRFDLEEFCKLVEQHRPSRAHLVPPILIGLGKSPVVDQYDCSSIRVISSAAAPMGPET
EDAVQKRLQCTVKQAWGMSELSPLGTVNSDFNTKSGSVGPPVSSTYAKIVDKHGYSLGPH
QTGELLIKGPQVMMGYLDDPEKTAECLTESGWLRTGDVAYYDEEGFFFITDRIKELIKVR
GYQVAPAELEALLLTHEAVNDTAVIQVEDESAGELPRAYIVLENNEGSQATTATVIYEWV
KERVAPYKRLDGGIEFVDAIPKSASGKTLRRILRDRVKAATDL
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccagctggaaacctcacggcggatatttggacaagcaggtcgccattgtggac
ggcaccacaggagcacagcgaacctttgcagatcatcacaaaacaattggaggtctagct
gctgctttacgggatgatatggatattcaggagacagactgcgttgccttgtactgtcca
aaccatgtcgactatttaccgacagcactggccgtttccttgacaggagccaagctgaca
cccatcaatccactgtatacccaacatgaactcggaaccattctagaacgcagccgtagt
tcggtactcataacgcaccaccggctgttggatgtggcactccagtcggcaagccaaagc
aagtttgtgaaacatgtgattgtgctcacggaccacggcgaggccattccagaagggaca
atccacttggacagtctgcggaatcatccgcaaactctgcattgtacggttgcgcaagtg
cacaaacaaacagacacgcatcctttcttactgccctactcgtcaggtacgactggactg
cccaagggtgtttgcctaagtcaccgcaacttggtcgccaacctactacagtacgatgaa
gtcgaaggtattatctttgctcccgatcaaaaggtgatatcaccgctaccattctttcat
atttatggcttcttggcatcactgttatactcggcctacaagggcattacactggtgaca
acttcaggtcgctttgatttggaggaattttgcaaacttgtggaacaacacagaccatcc
agagcccatctcgtcccacccattctcattgggctgggcaaaagtccggtggttgaccag
tatgactgctcatcaattcgcgtaatttcgagtgcggcagcgcccatgggtcccgaaacc
gaagacgccgttcagaaacgtttgcaatgtacggtcaaacaagcctggggcatgtcggag
ttatctccgcttggtaccgttaattcggatttcaataccaagtcaggcagtgtgggacca
cctgtttcttctacgtacgcgaaaattgtggacaagcacggatacagcctggggccgcac
cagacaggtgaactgctcatcaaaggaccacaagtcatgatgggctacttggacgatccg
gaaaagacggccgagtgtttgacggaatcgggatggttacggacgggcgatgtagcgtac
tatgatgaggaaggtttcttctttattaccgatcgcatcaaggaacttatcaaagtacgg
ggctaccaggtcgctcctgcagaattggaggcactattgttgacgcacgaggcggtcaac
gataccgccgtcatccaggtggaagacgagtcggctggtgaattgccgcgtgcgtacatt
gttttagaaaacaatgaaggttcacaagccacgaccgcaaccgttatctacgagtgggtc
aaggagcgagttgcgccgtacaaacgtttggatggcggcattgaatttgtagacgccatt
cctaaatcagcgagcggtaaaacattgcggcgaattttgcgagatcgagtcaaggcagct
acggacctatga
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