Phaeodactylum tricornutum: PHATRDRAFT_bd1073
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Entry
PHATRDRAFT_bd1073 CDS
T01075
Symbol
POLA
Name
(RefSeq) catalytic subunit p180
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHATRDRAFT_bd1073 (POLA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pti03032
]
PHATRDRAFT_bd1073 (POLA)
Enzymes [BR:
pti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHATRDRAFT_bd1073 (POLA)
DNA replication proteins [BR:
pti03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
PHATRDRAFT_bd1073 (POLA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_B_2
HHV-1_VABD
T7-like_Y65
divDNApol
Motif
Other DBs
NCBI-GeneID:
7204916
NCBI-ProteinID:
XP_002176321
JGI:
1073
UniProt:
B7S420
LinkDB
All DBs
AA seq
1147 aa
AA seq
DB search
DEPYLDLYWTDLCEQRNGDLWLFGKVRQPTTTTEASPSFVSACVVVQHNMRNLYVLPRQT
ASGSDDAKEDVEPDLQAVHGEVKSLLQTHVLPKTAGTSWASKPVQLTYAFDDPTVPRSAT
TYLQVLYDAKYPALPADVAHPAGSVSDNIARIFNAQASITETFLVQRRIQGPSWLRLRAP
RATTAPVSWCALEVILDSPDHVAPLAQQHATPPPPLTAVALKLQTWVHPKTHVSEIVAVS
VTCHDRIQLEGSSDAQHTKFQLSLIRPIPTDAGAVATFPRDLDAAIQQNMPNLRRQANER
ALLSCLLATLGAWDPDVVIGHNAWGYDLDVLLTRCAALKVPVWSRLGRRRRTGPPPKFGA
RKDYAIAQALAGRLVCDTYLSAKELLRETTYSLTNLAATQLKTKRQEIEPADIPQWFQSS
KTIVQLALSTLFDAQLIQTLALKLQVLPLSHQLTCVAGNLWSHTLKSNRAERTEYLLLHE
FHRLQTLPPEKHRALKDEGGSKAKYAGGLVLEPKKGLYDSYILLLDFNSLYPSIIQEYNL
CFTTLDWAGLAGTEDNVLPDLPDTEADRGVLPRVIQSLVERRRTVKKLLKSETNAVRKEE
LDIRQKALKLTANSMYGCLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIY
GDTDSIMINTRINDENDLPKVKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAA
KTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLE
ELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYI
ITVSEEAEAEDKKPKSSSSAERARHPEEILRSNGALKPDVEWYLTQQILPPVARLCEPIE
GMSQQVLAEKLGLDASRYNHAVRTSGDIDADELIDYTPASSLSDTERFKEVEKFYLHCYG
CGVESQFPGVYHVVTNSQTGNQNTVSGLHCTNPDCLRPMFWGHATQFECFARISNNISIW
TQDVMRRYYSSTIRCDEPGCSLETRQLSVVGGVCLRRGCNGKMCSVFSERSVYTHLKYME
SLFNIDHASTQWNKKKKKQDDSYALVKNDETIFKELHKVAMRGLESNGFNWISPAFWNGM
FSIAAKQ
NT seq
3442 nt
NT seq
+upstream
nt +downstream
nt
gacgaaccctacctggacctctactggaccgacttgtgcgaacaacgcaacggcgacctc
tggctctttggcaaggtccgccaacccaccaccaccaccgaagcctcgccatccttcgtc
agtgcctgtgtcgttgtccagcacaacatgcgcaacctctacgtcttgccccgacaaaca
gcctccggatcggacgatgccaaagaagacgtagagcccgatctccaggccgtacacggg
gaagtcaagtccctcctacaaacccacgtactccccaaaacggccggcacttcctgggcc
agcaaacccgtacagctcacctacgcttttgacgatcccaccgtcccccgctccgccacc
acttacctacaggtactctacgacgccaagtaccccgcgctccccgccgacgttgcgcat
ccagccggtagcgtcagtgacaacattgcccgtatcttcaacgcacaagcctcaatcacc
gaaacctttctcgtccaacgccgcattcagggaccctcctggttgcgtctcagagcaccg
cgggccactaccgcacccgtttcttggtgcgccctcgaagtcatcctcgactcacccgac
cacgtcgccccgctcgcccagcaacacgccacacccccgccgcccctcaccgccgtcgca
ctcaaactacaaacctgggtacatcccaaaacgcatgtttccgaaatcgtcgccgtctcg
gtcacctgccacgatcgcattcaattggaaggatcgagcgacgctcagcacaccaagttt
cagctttccctcattcgccccattcccaccgacgccggcgccgtagcgaccttcccccgc
gatctggacgccgccatccaacagaacatgcccaatttacgccggcaggccaacgaacgc
gccttgctcagctgtttgctggccactttgggggcctgggatccggatgtggtgattggg
cacaacgcgtgggggtacgatctggacgtgctcttgacccgctgtgcggcactcaaagtg
ccggtttggtcccgactcgggcgtcgtcggcgcaccggaccaccgcccaaatttggtgct
cgcaaggactacgccattgcccaagccctggctgggcgactcgtgtgtgacacctacctg
tccgccaaggaacttttgcgcgaaaccacctactccctgaccaacctggccgccacgcaa
ctaaaaacgaaacgacaagaaatcgaaccggccgatattccgcaatggttccagtcctcg
aagaccattgtacaattggcgctgtcgaccctctttgacgcccaattgattcaaacgctg
gcgttgaagctgcaagtgttgccgttgtcgcaccaactcacgtgcgtcgccggaaatttg
tggtcccacacgctcaaatccaaccgcgcggagcgtaccgagtaccttctcctgcacgaa
tttcaccgacttcagacgctacctccggaaaaacaccgcgctctcaaggacgaaggcggc
tccaaagccaagtacgccggtggacttgtactggaacccaaaaagggactctacgattcc
tatattttgctacttgatttcaattctctctacccgagtattattcaagaatacaatctg
tgctttaccacgctcgattgggccggtttggcgggcaccgaggacaacgtgctgcccgac
ttgcccgataccgaagcggaccggggcgtcctaccccgcgtcattcaaagcctcgtagaa
cgccgtcgaaccgtcaagaaacttctcaagtcggaaacgaacgctgtacggaaagaagag
ttggacattcgtcaaaaggcgctgaaactgacggccaactcgatgtacggctgtctcggt
ttttcgaactcgcgattctttgcgcaacccattgcagccttgatcacgtccatgggacgc
gagattctgcaacgaacggtggacattgctcaacaaaaagttggtctcgacgttatttac
ggagacaccgatagtattatgatcaatacccgtatcaacgatgagaacgacttgcccaag
gtcaaggagctgggcgaacgcgtcaaaaaagaagtcaaccgactctaccggactttagaa
ctagaaatcgacggtattttccgttccatgctgttgctcaaaaagaaaaagtacgctgcc
aagactgtggaagaaggtccgaacggcgaagtcaaatacggtcaagaactcaaaggcctg
gatttggttcgtcgtgattggtgcattcaatccaaagatacagggcgctacgtgacggaa
cagattttgtcgggtcaagagagtgatattgtgattgagaatattcacagtcatctcgag
gagctcgccacaaagatgcgcgccgggaatctgcctctcgaaaagtacacgattaccaag
gggctcagcaaacaccccaacgaatacccggatggaaaatcgcaaccgcacgttcaagtg
gccatggtcatgctcaagaataatcgccccgtaaatacaggtgaccacattccgtacatc
atcaccgtatcggaagaagcggaagcagaagacaaaaagccgaaatcctcttcttcggcc
gagcgtgctcgccaccccgaagaaattttacgaagcaacggagcattgaaacctgacgtc
gagtggtatttgacgcagcaaattttgccacctgtggctcgtctttgcgagccaattgaa
ggaatgtcgcaacaggtcttggccgagaagctgggtttggatgcttcccgctacaaccat
gctgttcgaaccagtggagatattgatgccgacgaactcatcgattacactccagcatcg
tctctttcggacacggagcgttttaaagaagttgaaaagttctatctccattgttatggc
tgtggggtggagagccaattcccgggtgtctatcacgtcgttacaaactcccagaccgga
aatcaaaacacggtatcaggtctgcattgcaccaaccctgattgtcttcgtccgatgttt
tggggtcacgcgacccaatttgagtgctttgcgcgcatttccaataacatttcaatctgg
acccaagacgtcatgcgcaggtattattcaagtacaattcgatgtgatgagcctggctgc
agcttggaaacgcggcaactttcggtggttggcggcgtttgtctacgccgtggatgcaac
ggaaagatgtgttcagttttcagcgaacgttccgtctacacgcatcttaagtacatggag
agtctgttcaatattgaccacgcctcgactcagtggaataagaaaaaaaagaagcaagac
gactcctacgcattggtcaagaatgacgagactatctttaaagagctacacaaagttgcc
atgaggggccttgaatcaaacggattcaattggatttctcctgcattttggaatggaatg
ttttccattgcggctaagcagt
DBGET
integrated database retrieval system
