Phaeodactylum tricornutum: PHATRDRAFT_bd224
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Entry
PHATRDRAFT_bd224 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHATRDRAFT_bd224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pti03041
]
PHATRDRAFT_bd224
Spliceosome [BR:
pti03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PHATRDRAFT_bd224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
7205016
NCBI-ProteinID:
XP_002176421
JGI:
224
UniProt:
B7S4A9
LinkDB
All DBs
Position
Unknown
AA seq
166 aa
AA seq
DB search
MANRTDPLISSVSGSDPQNLLEYITRQKIYDSRFWKEECFGLTVADVLEKSTSLQCIGAL
PAHFLALCLKLLQLHPETELVTETFVDQEDFKYTRVLGCLYLRLTGRPTEIYERLEPLYR
DRRKLRVWTPPCWGLKHVDDFIHECLTEPRILNLSLPRLPSRRSLQ
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcgaaccgaccctctcattagcagcgtatcggggagtgatccccagaacttg
ttggaatacattacgcggcaaaagatctacgattcgcggttttggaaagaggaatgtttc
ggcttgaccgtggcggacgtgttggaaaaatcgacgtcgctgcagtgcatcggcgctctc
cccgcccactttctggcgttgtgtctcaagctactgcagctgcatcccgaaacagagctc
gtgaccgaaacctttgttgaccaggaggatttcaaatacacgcgggtcctcggctgtttg
tacctgcgcttgacgggccgtcccacggaaatctacgaaagactcgagccactgtatcgt
gaccgacggaaattacgggtatggacaccaccgtgctggggtttgaagcacgtggacgat
tttattcacgaatgtttgaccgaaccgcggatactgaacctgtccttgccgcgattgccg
tcccgacggtctttgcaa
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integrated database retrieval system
