Phaeodactylum tricornutum: PHATRDRAFT_bd780
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Entry
PHATRDRAFT_bd780 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATRDRAFT_bd780
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATRDRAFT_bd780
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATRDRAFT_bd780
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
PHATRDRAFT_bd780
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class I (G)
PHATRDRAFT_bd780
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PHATRDRAFT_bd780
Prokaryotic type
PHATRDRAFT_bd780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
CysS_C
DALR_2
tRNA-synt_1f
DUF4830
Motif
Other DBs
NCBI-GeneID:
7205014
NCBI-ProteinID:
XP_002176430
JGI:
780
UniProt:
B7S4C9
LinkDB
All DBs
AA seq
568 aa
AA seq
DB search
MIVRYAPALTLAFLCSLRTSLPTHAWLPVVPWGSRRPRQRATPTIPGVPWFPSILTLQTT
STPTTTDAPVLSLFNSKTRAKEPFRPVRADTNVVSMYTCGPTVYDFAHVGNFRAFLTYDV
LKRVLRYLGYHVTHVCNLTDVDDKIIQRANEQKIDHVQTLTRRYEQHFRDDLQALNIQPA
CQYPRATEHIDDMMDLIRVLRDKELAYETPDGSWYFRTQAQPRYGTQLVQLNYQEMAQTE
RGESDDKEHFADFCLWKAFKTGVDRMDAAWESNDIALGRPGWHLECSAMARHFFGDDTID
LHGGGIDLKFPHHENEIAQSEGATGNVFCNCWFHNGFVNMDNEKMSKSLGNFLTLRGACP
TPDDVRAYRYLAVSSQYRQALAFTPQAMTAARNAIARMDKIKNQLEECTRVNGASVVDET
TDSELPTVARTALENFEVAICDDLSMPRASAALFSLVKAAEGELKRVNKVSDDEVSLDYT
GLRRILDAMKQMDQVFGIFYRVPVSEEEETAQEEALVIPDDVVELVERRTAAKEAKDWEL
ADALRSQVTELGYAVKDVKGEDPIVTQL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgattgtacgatacgcacccgcgctaactttggcgttcctctgtagcttacggacgagc
cttcccacgcatgcttggctccccgtcgtgccgtggggttcccgacgtccacgccagcgc
gcaacacccacgattcccggggtcccatggttcccgtctattctcacgttacagactacg
tccacaccgacgactaccgacgcgcctgtgttgtccttgttcaattccaagacgcgcgcg
aaggaacccttccgaccggtccgcgccgacacgaacgtcgtgtccatgtacacgtgcggt
ccgacggtgtacgatttcgcgcacgtgggaaactttcgggccttcctcacgtacgatgtc
ctcaaacgtgtcttgcggtatcttggctaccacgtgactcacgtgtgcaatctcaccgac
gtggatgataagatcattcaacgtgccaacgaacagaaaatcgatcacgtacagactctc
acccgtcgctacgaacagcactttcgggatgacctgcaggcactcaacatacaaccggcg
tgccagtatccccgggccacggaacacattgatgatatgatggatttgattcgtgtcttg
cgggataaggagttggcctacgaaacaccggatgggtcctggtactttcgaacccaggcg
caaccgcgttacggtacccagctcgtgcaactcaactaccaagaaatggcccaaacggaa
cggggcgagtcagacgataaggagcatttcgccgatttttgtttgtggaaagccttcaag
actggtgtggaccgcatggatgcggcgtgggagtcgaacgacattgcactgggtcgtccc
ggttggcacttggaatgctccgccatggcccgacacttctttggtgacgacaccatcgac
ttgcacgggggtggcatcgatctcaagttcccgcaccacgaaaacgaaattgcccaatcc
gaaggggcaaccggcaacgtattttgcaattgctggttccacaacggctttgttaatatg
gacaatgagaaaatgtccaaatcgctcggcaactttttgaccctgcgcggagcttgtccg
acgccggacgatgtccgagcctaccggtatttggccgtcagcagccagtaccgacaagcg
ctggcctttacgccgcaagccatgacggcggctcgcaacgcgattgcccgtatggacaag
attaaaaaccaattggaagagtgcacacgggtgaacggggccagcgtggtggacgagacg
acggacagcgagctgcccacggtagcccgtacggcgttggagaattttgaagtcgcgatt
tgcgacgatttgagcatgccgcgggcatccgccgcactcttttcactcgtcaaggctgcc
gaaggcgagctcaagcgtgtaaataaagtgagtgacgatgaagtgtcgttggactatacc
ggtctccgacggatcctcgatgccatgaagcaaatggatcaagtgtttggtatattctac
cgagtaccggtgtcggaagaagaagaaactgctcaagaagaagccttggtaataccagac
gatgtggtggagctggtagagcggcgaacagccgcgaaagaagccaaagactgggaattg
gccgacgccttgcgatcccaagtaacggaattgggttacgcggtcaaggacgtcaaaggt
gaagatccgatcgtcacacaactgtag
DBGET
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