Phaeodactylum tricornutum: PHATR_10209
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Entry
PHATR_10209 CDS
T01075
Symbol
COPgamma
Name
(RefSeq) hypothetical protein
KO
K17267
coatomer subunit gamma
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATR_10209 (COPgamma)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pti04147
]
PHATR_10209 (COPgamma)
Membrane trafficking [BR:
pti04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PHATR_10209 (COPgamma)
Exosome [BR:
pti04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PHATR_10209 (COPgamma)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
COP-gamma_platf
Coatomer_g_Cpla
HEAT_2
Cnd1
HEAT_EZ
HEAT
PDS5
TPR_Vitellogenin
HEAT_MROH2B_C
Phage_tudor
Coatomer_b_Cpla
Motif
Other DBs
NCBI-GeneID:
7204161
NCBI-ProteinID:
XP_002186065
JGI:
10209
UniProt:
B5Y4T4
LinkDB
All DBs
Position
3:<456549..>459374
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AA seq
910 aa
AA seq
DB search
MLKEVQELAEKFKVEEDEAYVSPYAHLEKATVLQEARIFHDPTAVRESPRKCCTVIAQLL
HLQNTGQYLSGVEATEVFFGVTKLFMSDDASLRRMVYLFIKDVAETCDPDDVIIVTSCLT
KDMTCDVDLYRGNALRVLVRIVDAAMLGAIERYVKQAIVDSSGQVSSSALVSASHLFASS
PECAAVVRRWISETTEATSSPNEMVQFHAMQLLYQIKSHDRLGVSKLVTQYSQRNTLRSP
LALVLLVRYTSKLLHDEVSEGRASGSYQESTSTVVQAGYQFLEASLRHKSELVVYEAARA
CCHLPAAEPQDLQPAIGVLQLFLSSPKPAVRFASIRTLAQVANQHPRVVSKCNEDLEALI
GDSNRSIATLAITTLLKTGSENSIDRLLKQISAFLTEIADEYKITVVRSLQKLCLTYPSK
HRVLVGFLSNFLREEGGFDFKRSIVNSIISLIRAVPESTESSLLHLCEFIEDCEFTMLST
QILHLLGELGPKTSAPPRYIRFIYNRVILENSAVRAAAVSALTKFAASCPSLRTSILTLL
QRSLVDEDDETRDRAAIAVATLQNAMEAFPYVAPPEDDVVGDELPPDVPDPDDPAAYVLL
EPLPMSFDKLERSMKAYMLTPMTMESPDPITVMALPIVEDTEVADPAAAIYAIPELANLG
RAFRSTAPVHLTESETEYVVQCTKHIFASHVVLQFSVQNTIDDQRLDNVTVLLDDSESEI
FTVSGEIACDGIKYGDTKHCFAILERNAEIQLTPSHFTCELRFTVVQVDSTTGEEEGDKF
EEEYPLEDLEIATSDFMAKVAVPDFRKAWEAVGNENEVLEKFALQFKKMEDAVAAVLDFL
GMQACDGTATVKPNAGGKPHMLHMSGVFVGGQQVLSRAQIVMQGTNSVVLKIAVRSEDSD
VSRIVADCIR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaagaagttcaagaactagccgaaaagtttaaagtagaagaagatgaagcttac
gtctccccgtacgctcaccttgaaaaggccacggtcttgcaagaagcacgtatatttcac
gatcctacagcggtacgtgaatcaccacgcaaatgctgtacggtaattgcgcagcttttg
caccttcaaaacactggtcagtatctcagcggagtggaagcaaccgaagtcttttttggc
gttaccaagctgtttatgagtgatgatgcttccttgcgccgcatggtttatttgttcatt
aaggatgtcgcggaaacctgcgacccagacgatgtaatcattgtcacgtcctgcttaacc
aaggacatgacgtgtgacgttgatctctatcgcggaaatgctctccgtgtcctggtgcgt
atcgttgatgctgccatgctgggtgcaattgaaagatacgtcaagcaagctattgtagat
agctcgggacaagtctcgagtagcgctttggtttcggcctcgcatttgtttgcttccagt
cccgagtgcgccgctgttgttcgtcgatggatttcagaaacgactgaggctacttccagt
cccaacgagatggtgcagttccatgcaatgcagcttctctatcagatcaagtctcacgat
cgtctcggagtttccaagctggtgactcagtacagccaacggaatactcttagatctcct
ttggcgttggtcctgctcgtgcgttacaccagcaaacttttgcacgacgaggtctcggaa
ggacgcgcttccggatcgtatcaagagtccacttcgacagtcgttcaagcaggctaccaa
ttcttggaagcttcccttcgtcacaagtctgaactagtcgtctacgaagccgctcgagca
tgctgccatcttcccgctgctgaacctcaagacttgcagcccgccatcggagttcttcaa
ctctttttgtcgagtcccaagcctgctgtccgttttgcctccattcgaaccctagctcaa
gtcgctaaccaacacccgcgtgtggtgagcaagtgtaacgaagaccttgaagctttgatt
ggcgactcaaaccgttccattgccactctggctatcaccactttgctgaaaacaggctct
gagaattctatcgaccggctcttgaagcaaatctcggctttcttgacggaaattgcggac
gagtacaagatcactgttgtgcgttctttgcagaaactgtgtttgacgtacccaagtaag
catcgtgtcttggtgggatttttgtccaactttttacgtgaagaaggcggctttgatttt
aagcggtccatcgtcaacagtattatttctttgattcgtgcggttccggaatcgactgaa
tcctcgctcttgcatctgtgcgaattcatcgaagactgcgagttcaccatgctttcgaca
caaatcctgcatttacttggtgaattgggacccaagacgagcgcccctcctcgttacatt
cgtttcatttacaaccgtgtcattttggaaaattccgctgttcgagcagctgctgtctca
gccttgaccaagtttgccgcgtcttgcccgtctctccgaacatcaattcttacccttctc
caacggtctttagtcgatgaggacgacgagacccgtgatcgtgccgccattgctgttgcg
actctacagaacgctatggaggcatttccttacgtggcgccacctgaagacgacgtggta
ggcgatgagcttcctcccgatgtgccagacccagacgatccggctgcctatgtgttgctc
gagcctttgcccatgagctttgacaagttggagcgatccatgaaggcttacatgttgact
ccaatgacgatggaaagtcctgatccgattacggtcatggccttgcccattgtggaagac
acggaagttgctgatcctgccgcagcaatttatgccattccagagctggcgaacttagga
cgcgcctttcgatcaacggcgcctgtgcatctcactgaatcggagactgagtacgtcgtg
caatgcacgaaacacatctttgcttcccatgtcgtcttgcagttcagtgttcagaatacg
attgacgaccaacgattggacaatgtgaccgtattactggatgacagcgaatcggagatc
tttactgtgtccggcgagattgcctgtgatggcatcaagtatggtgataccaagcattgt
tttgccattttggaacgcaatgccgaaattcagctgacgcccagtcatttcacttgcgag
cttcggttcactgtggtgcaggttgattctacaactggagaagaggaaggagataagttc
gaagaagagtatccgctggaagatctcgagatcgcaacttccgatttcatggctaaggtc
gctgtgccagatttccgcaaggcctgggaagcagtcggaaacgagaatgaagtcttggag
aagtttgctttgcaattcaagaagatggaagacgcagtagcggccgttctcgacttcctg
ggtatgcaggcttgtgatggtacggccacagtcaagccaaatgctggcggtaaaccacat
atgcttcatatgagtggcgtttttgtaggaggccaacaagtgctctcccgggctcaaatt
gtgatgcaaggcaccaatagtgtcgtactcaagattgcagtccgaagcgaagattctgac
gtgtcacgtattgtcgccgactgcattaggtaa
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