Phaeodactylum tricornutum: PHATR_13237
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Entry
PHATR_13237 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K23801
nuclear mRNA export protein PCID2/THP1
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pti03019
]
PHATR_13237
Messenger RNA biogenesis [BR:
pti03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX-2 complex
PHATR_13237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCI
Motif
Other DBs
NCBI-GeneID:
7204727
NCBI-ProteinID:
XP_002185769
JGI:
13237
UniProt:
B5Y433
LinkDB
All DBs
Position
11:706687..707611
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AA seq
241 aa
AA seq
DB search
AEEGSKKAGVLFIVNELFAIYFRLNTLRLCKNLQKPVETRKLHTQGVMGQMVTYNYYVGR
LSLFEDQYAEAESKLEFALSNCHKNAFQNKQRILRYLVPVKLFRGRMPSGQLLTKYKLDE
FLPLVDGIRKGDLRTFNDALIQFQDRFIRQGTYLLLEKCKVVCYRNLFRRVHLLLEKHQI
SLVDVASALKYLGMPADLDEVECILANLIYRGYIRGYLSHAKRVLVLSKRDPFPISAVVK
Q
NT seq
726 nt
NT seq
+upstream
nt +downstream
nt
gccgaggaagggtccaagaaagccggggtcctcttcattgttaatgagcttttcgcgatt
tactttcgtctaaatactctgcggctgtgtaaaaatttgcaaaaaccggtcgaaacccgc
aaattgcatacacaaggggtcatggggcaaatggttacgtacaactactatgtcggtcga
ctgagtttgtttgaagatcagtatgccgaagcggagtccaagctggaattcgcgctaagc
aattgtcacaagaatgcgtttcaaaacaagcagcgaattcttcgatacctagtgcccgtc
aaactatttcgtgggcgaatgccgagtggtcaactgctcaccaaatacaaacttgatgaa
tttctaccactggtggatggtatccgtaaaggcgacttgcgcacattcaacgacgcttta
attcagtttcaggatcgctttatcaggcaaggaacctatctgctattggagaagtgcaag
gtggtctgttaccggaatttgtttcggcgggtgcatttacttctggaaaaacaccagata
tcgctggtagatgttgccagcgcactgaagtatctaggcatgccagccgatttggacgaa
gtcgagtgcatcttggccaatctcatttatcgtggctacattcgcggctatctttcacac
gccaaacgagttttagttttgagcaagagggacccgtttcccatttcggctgttgttaag
caataa
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