KEGG   Phaeodactylum tricornutum: PHATR_13417
Entry
PHATR_13417       CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03060  Protein export
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    PHATR_13417
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pti02044]
    PHATR_13417
Enzymes [BR:pti01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     PHATR_13417
Secretion system [BR:pti02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   PHATR_13417
  Eukaryotic Sec-SRP protein
   PHATR_13417
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_16 cobW AAA_33 AAA_30 nSTAND_NTPase5 APS_kinase nSTAND3 AAA_22 AAA MeaB Peptidase_S55 CbiA ResIII MobB AAA_19 DO-GTPase2 NPHP3_N NNH1
Other DBs
NCBI-GeneID: 7204732
NCBI-ProteinID: XP_002185775
JGI: 13417
UniProt: B5Y444
LinkDB
Position
11:731237..732932
AA seq 510 aa
MVLAELGGKLRDSLRKLQSASTQGVTEKEVDALLSDVARALIEADVNVKLVMQLRASIKG
KVEDLLDDDDEKQPNVRAQRDLAKTIQRAVVDELVALLSPTYAQKAYTMRKGKPNVVLFV
GLQGAGKTTSIAKFAHYYQRRGWKTAMVCADTFRAGAFDQLKQNATKLRVPFYGSYTEAD
PVVIAEDGVRQFVKDRYEVIIVDTSGRHKQESALFDEMQEISEAVRPDNTVLVMDATQGQ
AVYDQALAFHNAVDVGAVIVTKLDGHAKGGGALSAVAATSSPILFLGSGEHFDDLDPFNA
QSFVSKLLGFGDVRGLMDAMKSVTDSKTQEQLMERMSKGEFTLRMMYQQFEKVMSMGPLN
KLVGMMPGMPDYLVPKGGDQQATDRLRKFMIMMDSMNNAELDGKIDMHVKDDPQIESRIR
RIAAGSGSHPNEVKMLLLAHKQFEGMVSKMGKSGLMGKGAQQRQAQLQAQMRKNPNFINQ
RLNQMDPRMLQQMGGRESVMAMMQQMAKGG
NT seq 1530 nt   +upstreamnt  +downstreamnt
atggtactcgccgagttgggtgggaaattgcgggactctttgcgcaagttacagtcggct
tccacgcagggcgtcacggaaaaggaagtcgatgcgctgttgagcgacgttgcccgggcc
ctcattgaagccgacgtcaacgtcaaactggtcatgcagttgcgggcgtcaatcaagggc
aaggtggaggatttactggacgacgacgatgaaaaacaaccaaacgtgcgggcccaacgc
gatttggccaaaacgatccaacgtgcggtcgtcgatgaactcgtcgccctcttgtcgccg
acctatgcgcaaaaggcctacacgatgcgcaagggaaaacccaacgtcgtattattcgtc
ggactccagggtgccggaaagactacttctattgccaaattcgcgcattattatcaacgt
cgtgggtggaagacggccatggtctgtgccgatacttttcgcgccggcgcttttgatcag
ctcaaacaaaacgccaccaaactgcgggttcccttctacggttcctacacggaagcagat
ccggtagtgatcgccgaagacggagtcagacagttcgtcaaggatcggtacgaagtcatc
attgtcgatacgtccgggcgacacaagcaggagtcggccttgtttgacgaaatgcaagaa
atatcggaggcggtgcgcccggacaataccgttcttgtcatggacgcgacgcaaggacag
gcggtttacgatcaagcattggcttttcacaatgctgtggatgtaggtgccgtcatcgtt
acgaaactggatggccacgccaaaggtggcggggccttgtcggctgtcgcagccacgtct
tctcccattttgtttctcggatcgggagaacattttgacgaccttgatccgtttaacgcc
cagtcgtttgtttccaaacttttgggatttggggacgtgcggggattgatggatgccatg
aaatcggtgacggattcaaaaacccaggaacaacttatggaacgcatgtccaagggagaa
ttcactttgcggatgatgtaccagcagtttgagaaagtcatgagtatgggccctttgaac
aaactggttggaatgatgccaggtatgccagattatctcgtaccgaaagggggcgatcag
caagccacggatcgcttgcgaaaattcatgatcatgatggattccatgaacaatgccgaa
ttggatggaaaaattgatatgcatgtaaaggacgatccacaaattgaatcgcggattcgc
cggattgccgcgggctcggggtcgcaccccaacgaggtgaaaatgctcctcctggcacac
aagcagttcgaaggaatggtctccaaaatgggaaaatctgggctcatgggcaagggcgcc
cagcaacgtcaagctcagttacaagcgcaaatgcgcaaaaatcctaactttatcaatcaa
cgcttgaatcagatggatccacgcatgttgcagcaaatgggaggccgtgaaagtgttatg
gccatgatgcagcaaatggccaagggcgga

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