Phaeodactylum tricornutum: PHATR_13537
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Entry
PHATR_13537 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pti03009
]
PHATR_13537
Enzymes [BR:
pti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
PHATR_13537
Ribosome biogenesis [BR:
pti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PHATR_13537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
7204623
NCBI-ProteinID:
XP_002185849
JGI:
13537
UniProt:
B5Y3J7
LinkDB
All DBs
Position
11:complement(<263626..>264594)
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AA seq
290 aa
AA seq
DB search
HISQSRDSTTKLLLRLSDGLEVETVIIPWTGGRSTLCVSSQVGCRQGCTFCATGRMGKLR
SLNADEILAQLFFARKICRQKNLPPVTNVVFMGMGEPADNKDAVIRATDIMTTRELFQLS
ASKVTVSTVAPTPDSFLQFAHAHCVLAWSVHAANDELRRQLVPTTKHAMTELRQGLIDTL
LIRPHNFRTTMLEVALISGINDSEKEADELVDFAQVIIDEVPGCKLVVNLIPFNDIGQNR
YTKPSMEAVSVFQKRLREFGLVAHIRTTRGDDESAACGQLATNKQKQRVF
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
cacatatcgcagagtcgggattccacgacaaaactcttgcttcgattgtctgatggacta
gaagtggagacagtgataatcccatggactggggggcgtagtaccctctgcgtgagttcc
caagtaggatgtcgacaaggatgcactttttgcgcaacgggtcgaatgggaaagctaagg
tcgctaaatgcggatgagattttggcacagctattctttgctcggaagatctgtcgacaa
aagaatctaccaccagtcacgaacgtcgtcttcatggggatgggtgaacctgccgataac
aaagatgctgtgatacgggctaccgacataatgaccactcgggaactatttcaattgtct
gcatctaaagtcacggtttccactgtggctcccacgcccgattctttccttcaattcgcc
catgcgcattgcgttttagcctggtccgtacacgcggccaatgatgagttgcgacgccaa
ttagtacccaccacaaaacatgccatgacagaattgcggcaaggtctaatagatacgctg
ctcattcgaccacacaattttcgaacaacaatgcttgaagtggcgcttatttcggggatc
aacgattcggaaaaagaggctgacgagttggtcgattttgcccaggtcatcatcgacgag
gttcctggatgtaagctggttgtcaatttgattcctttcaacgacattggccaaaacaga
tacacgaaacctagcatggaagccgtgtccgtgttccaaaagcgtttgcgcgagttcggt
ctcgttgctcatatccgaaccactaggggagacgacgaatctgcagcgtgtggccaactc
gccacaaacaagcaaaaacagagagtattctaa
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