Phaeodactylum tricornutum: PHATR_18524
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Entry
PHATR_18524 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pti
Phaeodactylum tricornutum
Pathway
pti00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
PHATR_18524
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pti01007
]
PHATR_18524
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pti03016
]
PHATR_18524
Enzymes [BR:
pti01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
PHATR_18524
Amino acid related enzymes [BR:
pti01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
PHATR_18524
Transfer RNA biogenesis [BR:
pti03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
PHATR_18524
Prokaryotic type
PHATR_18524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-GeneID:
7204357
NCBI-ProteinID:
XP_002186340
JGI:
18524
UniProt:
B5Y4R6
LinkDB
All DBs
Position
3:complement(413705..417174)
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AA seq
766 aa
AA seq
DB search
MGKGDGKKEKKGSPSETIGWGATPKFAVLQYPGETQPVGTLSTAASHETSNDATTSLTPG
RRVQAGRGPKMASTGLAIGRDSFTVRVRDPAWLTSRAAVYDRIRASRAAELALKTPTPIR
VVMPDGKVLEQDQEGQNFRAWQTTPWDVARVIAQGLADAATVARENQLLWDMTRPLVGNV
AKLELLKFEDDQDAKTVFWHSSAHMMGEALEHLYGCKLTIGPPLAGGFYYDSYMGKDAFR
EEDYSPVEGEVGKIIKQKQKFERLVITKEEGLELFADNPFKVNILTTKVPDGSRTTVYKC
GDLIDLCRGPHLSHTGKVKAFAATRHSATNWLGDTNNDTLQRMYGISFPDKKMLKVWKEN
QEKAKERDHRRIAAKQDLIMFHDLSAGSAFWLPHGARIYNKLIDFIKSHYWNRGYDEIIT
PNIYNLDLWHKSGHALHYKDAMFCFDVEGQEWAMKPMNCPGHCLMFANSIRSYRDLPLRF
ADFGVLHRNELSGALTGLTRVRRFQQDDAHIYCREDQIEKEVVDALNFMKDVYDTFGMTY
KLELSTRPQKALGDVALWERAEEALANAMDMFAGKGGWRVNPGDGAFYGPKIDIKVMDAM
DRVHQCATVQLDFQLPIRFDLQYTTASKEEGQQFARPVMIHRAMLGSVERMFAVLCEHYG
GKWPFWLSPRQVMLVPVHAEFFDYSEDIRAKLHAEGFYVDVDTSKNTFQKKVRNAQVAQY
NFQFVVGKAEVANGSVNIRNRENQVEGEKKIDEMIAMLKQLREEHK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagggcgacggcaaaaaggagaaaaagggttccccatcggaaacgatcggttgg
ggcgcgacgcccaaatttgccgtcttgcagtatccgggcgaaacgcaacccgtcggaacg
ttgtcgaccgctgcttcccacgaaacctccaacgatgccaccaccagcctcacaccggga
cgtcgagtccaagccggtcggggtcccaaaatggccagtacgggcttggcaattggccga
gactccttcacggtccgggtccgcgatccggcctggttgacctcccgtgccgccgtgtac
gaccgcatccgcgcctcgcgagcggcagaactcgcgttgaaaacgccgacacccatccgg
gtcgtcatgccggatggcaaggtactggagcaggatcaggaaggccagaactttagggcc
tggcagacgacgccctgggatgtagcacgggtgattgcgcagggattggccgacgccgcc
acggtggctagggaaaatcagttgctctgggatatgaccagacccttggtagggaacgtg
gccaaactggaattgctcaagtttgaggatgatcaagacgccaaaacggtcttctggcat
tcatcggctcatatgatgggagaggcattggaacacctttacggatgcaagttgaccatc
ggaccgccgttggcgggaggattctattacgattcctacatgggcaaggatgcctttcga
gaagaagattactcccccgtggaaggggaagtaggcaaaattatcaagcaaaagcaaaag
ttcgagcgcctagtcattaccaaggaggaaggcttggagttgttcgccgacaatcccttc
aaggtcaatattcttactaccaaggtccccgacggatcccgcaccaccgtctacaaatgt
ggtgatctaatagatctgtgtcggggtccacacctgtcccataccggcaaggtcaaggcc
tttgccgcgacacggcattcggccaccaattggctgggagataccaacaacgataccctc
cagcgcatgtatggaatttcgttccccgacaagaaaatgctcaaggtttggaaggaaaat
caagaaaaggccaaagaacgcgatcatcgtcgtatcgcggccaagcaggatctcataatg
ttccatgacttatctgcagggagcgccttttggctgccgcacggagcccgcatttacaac
aagctcattgattttattaaatcacactactggaaccgcggctacgacgaaatcatcaca
cccaacatttacaatcttgatttgtggcacaagtccggccacgccctccactacaaggac
gctatgttctgttttgacgtggaaggtcaagaatgggctatgaaacccatgaattgtcct
ggtcactgtctcatgttcgccaattcaattcgttcctaccgtgatttgccgctgcgtttt
gccgatttcggagtgttgcatcgcaacgaactttccggtgctctcacgggcttgacgcgc
gtccgacgctttcagcaggatgatgcccatatttactgccgcgaggatcaaattgaaaaa
gaagtcgtggatgcgcttaattttatgaaggatgtttacgatacattcggaatgacgtac
aaactggaactgtccacacgtcctcaaaaggcgctcggggacgttgcgctttgggagcgc
gcggaggaagccctggcgaacgccatggatatgttcgctggcaagggtggctggagagta
aatccgggggacggcgccttttatggacccaaaatcgacatcaaggttatggacgccatg
gatcgtgtgcaccagtgtgctactgtacagctggatttccaactacccattcgatttgac
ctccaatacaccacggcgagcaaggaagaaggccagcagtttgctcggccagtgatgatc
catcgtgccatgcttggtagtgtggagcgcatgtttgccgtcttgtgcgaacactatgga
ggaaagtggccattctggctgagtcctcgacaagtgatgctcgtgccggttcatgccgaa
tttttcgattacagcgaagatattcgtgcgaaactccatgccgaaggtttctatgtggat
gtcgatacctcgaagaatacatttcaaaagaaggttcgcaatgcacaggtagcgcagtat
aactttcagtttgtcgtaggcaaggccgaggtcgccaacggctcggtcaacatccgcaat
cgggaaaatcaggtcgagggtgagaaaaagattgatgagatgatcgcgatgctcaagcaa
ttgagagaggaacacaagtag
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