Phaeodactylum tricornutum: PHATR_18549
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Entry
PHATR_18549 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K07204
regulatory associated protein of mTOR
Organism
pti
Phaeodactylum tricornutum
Pathway
pti04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
PHATR_18549
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pti04131
]
PHATR_18549
Membrane trafficking [BR:
pti04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
PHATR_18549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Raptor_N
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40
Beta-prop_TEP1_2nd
HEAT
Beta-prop_IFT140_1st
HEAT_2
Peptidase_C14
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
PDS5
Beta-prop_RIG_1st
HEAT_EZ
DUF446
WDR90_beta-prop_4th
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
7204174
NCBI-ProteinID:
XP_002186361
JGI:
18549
UniProt:
B5Y4V4
LinkDB
All DBs
Position
3:complement(504413..509119)
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AA seq
1250 aa
AA seq
DB search
MDPPDVVDKPHPCAVLHTWIDPNAERAATAREKIGERLEQQYSKWQTASTAWPLRKRRTV
DPTMEDVRSLCQHLRRHARNERVLFHYHGHGVPRPTHNGEIWAFDAKRTEYIALSVADVR
TWLGKPSIVVLDCSSAGVLVPFFTAPMADPSVAPSSTPSRAQTEPTNLREQASEWVSDTV
VLCPCSEGEWLPMNPDYPVDIFTSCLTTPLKIALRWFIQRNPVSMASLHPDAVDHIPGVF
NDRKTPLGELNWIFAAVTDSIAWNVLPKPLFQRLFRHDLLMSSMFRNFLLADRVLRSMGC
TPVSYPPLPPGISNHQLWQSWDLACETMLVQLMNDGTSRHPTNHTVSVSSPFFSEQLTAF
EVWLEFTSIHKMQLKLGMLEPPEPLPMVLQVLLSQTHRIRALHLLRRFLEFGPWAVNLSL
ILGIFPYVSKLLQSPDYKSLLVGIWASILAFDPSCRVDMLKNGILHHFVQYLTLDPDAYG
SVKEAKAARERTLAAFDLSITCCGYPMGQSECVRLRLHNHFCALFSAYEKTEKCQYDDME
LYLPARFRLWLCICIANMMKDNNATQAEAYNAGVHSRLFVRMSDQDPDVRAAVCYALGCL
LGTSAKNEQTGKNLLTIEVLLKAVEDASVVVRYEATLGLARAVGKYLDAFVSVASTAASN
EDRNMYVSLPPAVDLKTGDRFALVWSILRLLQHNDPFPFIAKAANDIVCVVFEHLLRRRL
TTSDRDDKGRQSLALRAEKLASNLTGIEEEQDSDGIAGHSIDSTPPLSEAPTQQPSAVMQ
KSPQADLRRVASESITGRNTAHSMEQNALDMNLSGVLKEDMVKGGPVHYILPKSQFFEWK
RDSFDINFEFVDDDTPADTDPLKMLYEQESEDALLAVEEEATLKKGELELQENMLLRNEG
VKMTSMVRFHAYEDVLMACGASDAVSMWCTNSGKQLTKFLNSKTKKARLTTSAWINEHAS
SLFMVGGDTGNVHVWGNLLESNGEACRTPAKLISAFQAAPMTAGQRGSGLICEWQSYSGT
LLAGGSSKTLRCWDLESEKLSNQFETNTDANLTTLTTAWDYDELGMGPGPKGYQGIGQDI
VVGGFSDGALRIFDIRTNQAGSSLQSSQPTRPRRKRATEFSEHKTWVVSTSFTAYGNRYE
LISGTISGEIKIWDLRMSSSIRTFAAQRSTMTSFAVHSKIPILATGSHAQFIKLLTLDGD
AFQVMRYHGKMASHRIGPVSCLAFHRFKPMLAAGATDAYIGLYTTKKRFI
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggatcctccagatgttgtggataaacctcatccctgtgcagtgcttcatacttggatc
gaccccaacgccgaacgtgcggccacggcacgcgaaaaaatcggagaacgccttgagcaa
cagtattccaagtggcagacagccagcacggcctggccgttgcgcaaacgacggacggta
gatccgaccatggaagatgtacggagcctttgccagcatctccgtcgacacgcccggaac
gagagagtcttgtttcattaccacggacatggtgtgccgagaccaacccacaacggagaa
atatgggcgttcgacgccaagcgtacagaatacattgccttatcggttgcagatgttcgc
acgtggctgggaaaacccagtattgttgttttggactgttcctccgctggcgtgctagtg
cctttctttacggcgccaatggccgatccttcggttgcaccctcctcgacaccatcgcga
gctcagaccgaaccgacaaatctcagggaacaagcatcggagtgggttagcgacacagtc
gtactatgtccttgctctgaaggcgaatggctacccatgaacccagactatcccgtcgac
atttttacgtcgtgtttaaccactccactcaagattgctcttcggtggttcattcaaagg
aaccccgtcagcatggcttcccttcaccccgatgcagtagatcacattcctggtgttttc
aacgatcgaaaaactccactcggagaattgaattggatatttgccgccgtaacggactca
attgcttggaacgtactgcccaaaccgctatttcagcgactttttcgtcacgacttgctg
atgtccagtatgtttcgtaactttttattggctgaccgagttctgcgatcgatgggttgc
accccggtatcctatcctccgttgccaccgggcatttcgaatcatcaactgtggcaatct
tgggacttggcctgtgaaacaatgttggtgcagctcatgaatgacggaacttccaggcac
cccaccaatcacacagtgagtgtctcatcaccgtttttctcagagcaattgacagctttt
gaagtatggctagaatttacgtcaatccataagatgcagttgaaactcggaatgctggag
ccacccgaaccgctgccaatggtactacaggtcctacttagtcagacacaccgtattcgt
gcgttgcacctccttcggcggtttttagaatttggcccatgggcagttaacctgtcactc
attctgggaatttttccctacgtgtcgaaattgctgcaatctcctgactacaagagctta
ttggttggtatttgggcatctatcttggctttcgacccttcttgtcgcgttgacatgctg
aaaaacggaattcttcaccactttgtccagtatttgacattggacccggatgcatatggt
tcagttaaagaagccaaagccgctcgggagcgaaccttggctgcgttcgacttgtccatt
acttgctgtggttaccctatggggcagtccgaatgtgttcgacttcgcctccataatcat
ttctgcgcgctcttttctgcttacgaaaaaacagaaaaatgtcagtatgacgatatggaa
ctttatttgccagcgcgctttcgactttggttatgtatttgcatcgcgaatatgatgaaa
gacaacaatgcaacgcaggctgaagcgtacaacgctggtgtacattcacgcctatttgtg
cgaatgagtgaccaagatccggacgtgcgagccgcagtttgctatgctcttggttgcctc
ctcggtacttccgcgaaaaatgaacaaacagggaaaaatttgttaacgattgaggtctta
ttgaaagcagttgaagacgcgagtgttgtagtacggtacgaagctacactcggtctagca
cgagcagttggaaaatatcttgatgcctttgtatccgttgcctccaccgcagcaagcaat
gaagatagaaatatgtatgtttctttgcctcctgccgttgatctcaaaacaggcgatcgt
tttgcactggtttggagcatcttgcggttattgcagcacaatgacccctttcctttcatt
gctaaggcggcaaacgatatcgtgtgcgtagtctttgagcatttacttcgccgccgattg
actaccagcgatcgggatgacaaggggcgccagagtctagcgctgcgcgctgagaaactg
gcatcaaatttgacagggatcgaagaggagcaggactccgatggcattgcgggccattct
atcgattcaactccaccacttagcgaagcccccactcagcaaccctccgccgtcatgcaa
aagtcaccccaagccgatctacgtcgcgttgcttcagaatctataacaggtaggaacaca
gctcactcgatggagcagaatgcccttgatatgaatttatctggagtcttaaaggaagat
atggttaaaggcggtcccgtacattacatacttccgaagtctcaatttttcgagtggaaa
agggactctttcgacataaactttgagtttgtagatgatgatactccagctgatacagac
cctctcaaaatgctttacgaacaagaaagcgaggatgctttgctagcagtagaagaagaa
gccactttgaaaaagggcgagctggagctacaagaaaacatgcttttacgcaacgaagga
gtcaagatgacgtctatggttcggtttcatgcttatgaagatgtactgatggcttgcggc
gcgtcagatgccgtttcaatgtggtgcacaaactccggcaaacagcttacgaaatttctc
aatagcaaaacaaaaaaggctcgattgactacatcggcttggatcaatgaacacgcatcc
agtcttttcatggttggcggcgacactggcaacgttcacgtgtggggcaacctccttgag
agcaacggagaggcatgcagaacacctgccaagttgatctcagcctttcaagccgctccc
atgacagcgggacaacgcggtagtggactcatttgcgaatggcaatcgtacagtgggaca
ttgttggctggtggcagcagcaagactctgcgctgctgggatctagaatcggaaaaactt
tctaatcaatttgagaccaacacagacgcaaacctgacaactttgacgactgcttgggat
tacgatgaacttggaatggggcccgggcctaaaggatatcaaggcattggacaggatatc
gttgtcggcggttttagcgatggagctttgaggatatttgatattcgcaccaaccaggca
ggcagtagcttgcagtctagccaacctacacgacctcgccgaaagagagctactgagttt
tctgaacacaagacttgggtcgtttcgacttcgttcactgcgtatggaaaccgttacgag
ctcatttcgggaacaatatccggggaaataaagatttgggacttacgtatgtcttcaagt
attcgaacatttgctgcacagagaagcaccatgacgagctttgcggtccactcgaagatt
ccaatactggccactggatcgcacgctcagttcattaagttattgactctggacggcgac
gcattccaggtcatgcggtaccacggcaaaatggcgagtcaccggatcggaccggtgagc
tgccttgcattccatcgtttcaaacccatgcttgcggctggagcgacggacgcttacatt
ggactctacactaccaagaaaagattcatttaa
DBGET
integrated database retrieval system
