Phaeodactylum tricornutum: PHATR_28219
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Entry
PHATR_28219 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K03061
26S proteasome regulatory subunit T1
Organism
pti
Phaeodactylum tricornutum
Pathway
pti03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
PHATR_28219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pti03051
]
PHATR_28219
Proteasome [BR:
pti03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
PHATR_28219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
OB_PRS7
AAA_lid_3
AAA_2
AAA_5
AAA_22
AAA_16
DUF815
RuvB_N
nSTAND3
AAA_28
Prot_ATP_ID_OB_C
AAA_14
AAA_7
RNA_helicase
Mg_chelatase
TIP49
AAA_33
AAA_24
AAA_18
Motif
Other DBs
NCBI-GeneID:
7204540
NCBI-ProteinID:
XP_002185707
JGI:
28219
UniProt:
B5Y3S3
LinkDB
All DBs
Position
11:452658..454280
Genome browser
AA seq
447 aa
AA seq
DB search
MSSGECQTGNKGDYDEEEKEDAPPPLDEGDIVLLKSYGLGPYSTKIKDVEKEIKKHQQTV
KDLIGIKESDTGLSPPSMWDLNGDKQMMSEEAPLQVARCTKIITGDSDASNEGASSAVST
STKYVINVKQIAKFVVGLGETVAPTDIEEGMRVGVDRSKYSIQIPLPPKIDPTVSLMTVE
DKPDVTYDDVGGAKDAMEKLREVLELPLLHPERFVTLGIDPPKGVLLYGPPGTGKTLSAR
AVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKRACIIFFDEIDAIGGARTGS
DENGSDNEVQRTMLQIVTELDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP
DLEGRGHILRIHSKRMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFAIRARRKNVSE
KDFLESVNKVVKGYKKFSSTPKYMVYN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgagttccggagaatgtcagacgggaaacaagggcgattatgatgaggaggaaaaagag
gacgccccgcccccgctcgacgaaggcgatattgtcttactgaaatcatacggtttaggt
ccttacagcactaaaattaaagacgtcgaaaaagaaatcaaaaaacaccagcaaacggtc
aaggatttgattggtatcaaagaatcggacactggcctttctcctccgagtatgtgggat
ttgaatggcgataaacaaatgatgtcggaagaggcacccttacaagttgcacggtgcacc
aaaattattacgggagactccgacgcgagcaacgaaggcgcgtccagtgctgtttctacc
agcaccaagtatgtcattaacgtcaagcaaattgccaaatttgtggtgggactgggtgag
acagtggcacctacggatatcgaagaaggtatgcgtgtaggagttgatcgttccaagtac
agtattcaaattcctttgccacccaagatcgatcctaccgtgagtcttatgacagtcgaa
gacaagccagatgtcacgtatgatgatgttggaggtgctaaggatgccatggagaagctt
cgcgaagttttggagttgcctttactgcacccggaacgatttgtgacgctgggaatcgat
cctcctaagggtgtattattgtacggtcctccgggaaccggaaaaacattgagtgctcgt
gcggttgccaatcgtaccgatgcttgctttatacgtgtcattggttccgagcttgtacaa
aagtacgtcggcgaaggcgcccgtatggtgcgcgaactcttcactatggcccggtccaag
cgtgcgtgcatcatttttttcgacgaaatcgatgcgatcggtggcgctcgtactggatca
gacgagaatggaagtgataatgaggtacagcgaaccatgttgcagattgtgaccgagctt
gacggatttgatgcccgtggaaatatcaaggttttgatggcgacgaatcggcccgacaca
ctagacccggccttgttgcgcccgggacgtttggatcggaaggttgagtttgggttgccc
gacttggaagggcgcggacacattctacgcattcactcaaagcgcatgaactgcgaccgg
gatattcggtttgaactgattgcgcgcttgtgtccgaatactaccggagcagagttgcat
tcagtttgcacggaagcaggtatgttcgccattcgagcacgacgtaaaaatgtaagcgaa
aaagactttttggagtctgtcaacaaagttgtcaagggatacaaaaagttcagttctaca
cctaaatatatggtatacaactaa
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