KEGG   Phaeodactylum tricornutum: PHATR_28219
Entry
PHATR_28219       CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K03061  26S proteasome regulatory subunit T1
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03050  Proteasome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    PHATR_28219
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pti03051]
    PHATR_28219
Proteasome [BR:pti03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    ATPase subunits
     PHATR_28219
SSDB
Motif
Pfam: AAA OB_PRS7 AAA_lid_3 AAA_2 AAA_5 AAA_22 AAA_16 DUF815 RuvB_N nSTAND3 AAA_28 Prot_ATP_ID_OB_C AAA_14 AAA_7 RNA_helicase Mg_chelatase TIP49 AAA_33 AAA_24 AAA_18
Other DBs
NCBI-GeneID: 7204540
NCBI-ProteinID: XP_002185707
JGI: 28219
UniProt: B5Y3S3
LinkDB
Position
11:452658..454280
AA seq 447 aa
MSSGECQTGNKGDYDEEEKEDAPPPLDEGDIVLLKSYGLGPYSTKIKDVEKEIKKHQQTV
KDLIGIKESDTGLSPPSMWDLNGDKQMMSEEAPLQVARCTKIITGDSDASNEGASSAVST
STKYVINVKQIAKFVVGLGETVAPTDIEEGMRVGVDRSKYSIQIPLPPKIDPTVSLMTVE
DKPDVTYDDVGGAKDAMEKLREVLELPLLHPERFVTLGIDPPKGVLLYGPPGTGKTLSAR
AVANRTDACFIRVIGSELVQKYVGEGARMVRELFTMARSKRACIIFFDEIDAIGGARTGS
DENGSDNEVQRTMLQIVTELDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLP
DLEGRGHILRIHSKRMNCDRDIRFELIARLCPNTTGAELHSVCTEAGMFAIRARRKNVSE
KDFLESVNKVVKGYKKFSSTPKYMVYN
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagttccggagaatgtcagacgggaaacaagggcgattatgatgaggaggaaaaagag
gacgccccgcccccgctcgacgaaggcgatattgtcttactgaaatcatacggtttaggt
ccttacagcactaaaattaaagacgtcgaaaaagaaatcaaaaaacaccagcaaacggtc
aaggatttgattggtatcaaagaatcggacactggcctttctcctccgagtatgtgggat
ttgaatggcgataaacaaatgatgtcggaagaggcacccttacaagttgcacggtgcacc
aaaattattacgggagactccgacgcgagcaacgaaggcgcgtccagtgctgtttctacc
agcaccaagtatgtcattaacgtcaagcaaattgccaaatttgtggtgggactgggtgag
acagtggcacctacggatatcgaagaaggtatgcgtgtaggagttgatcgttccaagtac
agtattcaaattcctttgccacccaagatcgatcctaccgtgagtcttatgacagtcgaa
gacaagccagatgtcacgtatgatgatgttggaggtgctaaggatgccatggagaagctt
cgcgaagttttggagttgcctttactgcacccggaacgatttgtgacgctgggaatcgat
cctcctaagggtgtattattgtacggtcctccgggaaccggaaaaacattgagtgctcgt
gcggttgccaatcgtaccgatgcttgctttatacgtgtcattggttccgagcttgtacaa
aagtacgtcggcgaaggcgcccgtatggtgcgcgaactcttcactatggcccggtccaag
cgtgcgtgcatcatttttttcgacgaaatcgatgcgatcggtggcgctcgtactggatca
gacgagaatggaagtgataatgaggtacagcgaaccatgttgcagattgtgaccgagctt
gacggatttgatgcccgtggaaatatcaaggttttgatggcgacgaatcggcccgacaca
ctagacccggccttgttgcgcccgggacgtttggatcggaaggttgagtttgggttgccc
gacttggaagggcgcggacacattctacgcattcactcaaagcgcatgaactgcgaccgg
gatattcggtttgaactgattgcgcgcttgtgtccgaatactaccggagcagagttgcat
tcagtttgcacggaagcaggtatgttcgccattcgagcacgacgtaaaaatgtaagcgaa
aaagactttttggagtctgtcaacaaagttgtcaagggatacaaaaagttcagttctaca
cctaaatatatggtatacaactaa

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