Phaeodactylum tricornutum: PHATR_33295
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Entry
PHATR_33295 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11293
protein HIRA/HIR1
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATR_33295
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
PHATR_33295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Hira
WDR55
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR11_1st
HIRA_B
Motif
Other DBs
NCBI-GeneID:
7204380
NCBI-ProteinID:
XP_002186367
JGI:
33295
UniProt:
B5Y4W6
LinkDB
All DBs
Position
3:complement(542624..546324)
Genome browser
AA seq
1186 aa
AA seq
DB search
MNHNPRSRKGDMVFPRPCIHRERAVVNYLAGRDSRIISMVVAEVPLWVMHSSNASSNTTL
DGASGLATGGPFNKLSDGHFSRHHHFEHKAASSLALLDSASGRARKSAIYAVDVHPDGRI
FATAGGDCAVRIWNTQALFAPKNKGGSFAVAGSSDPTGKPNNATTTYVSTSASSGPEASE
SSAGEQESDVGPRDEMVHDLNSFVRRKKDPTVNQSSAVPAETTKSSTASGQSVADSSPVR
PSTHKRSHHQHRLLCTLSAHSGSSVLAVRFSSTGTYLASAGDDGCVCIYTHNEDTEGNLT
QEPSPHDEHWSRIKLCRGHGLDVVDLAWAPDDSYLVSCSLDSETPIIVWKTTHLGSSRRA
NATSMILNPFKVLGRKEHTSTVKGVSFDPAGSYFASSGDDPAVCVWRAHDDWGLETKIDA
SSGIFRRWKEDDTMALSSQSLFRRISWSTDGAFLCSTNSVVKNKHVASTISRDGWSVSSA
SSAAAGAANLVGHKQPVVVSRHASQLLSARKANVSGGQNGDDDEEPDYATLLALGDKRGF
VTIWSTKKSRPIFKLQCSESRSTVTDMAWGSLPRGDLMLLVTFLDGQVVALRFEVPSELG
NLLSKSERARVFQLRYGIDVNDVETFGQRHLFTGASSGPNLIENALQMTLEHTHTGIDDM
DDDTSTPGPEPEERLNDLQAVSIRSKQKESLSKGKKRIQPVLMAVTSKKTKPGAELLKTK
AVEPNQSIDPLQNAIDAASKASAAMATADSTKRDITVNAAPMDGLSGTAQSNSARPSVRP
NGPSSWMGTILPHSSERIHSLDLPLLGLQSMDVTTGFAEPCVAECTNSVKLPVGSRTTSI
PCVDVALSRDGKISWKDQIPGTSCSAIAASTTLMAVGTTDGCLQLYGTSPTIGWTCGQSF
RSHPSLVLGHPIVSLQLQETQGEDDEIFATLLTLTGDGTFAVYSVLPVLQLQFKGSVMPA
MSHMALGTSLTSEQHSIKISRIQITETNRVLLLLSLQTVDNAQLRGGLRGTTQIDAGVGG
SLQAFVFDQKAELWMKAADNRFVLSDFYSALPSAKFSPNGELSRLEDAVRIGALQASMKP
AQRGRLRDTDRHADEMFSRADLESGNFIPTRAHCEDRMACAIALESADEFKKWLSLYIKV
LCVVGHTDFLRVLVDILMNEPKDKRETIPDGMCWWMSIAPTVLFPR
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacaatccgaggtcgcgcaaaggtgatatggttttccctcgaccctgtattcat
cgtgaacgtgctgttgtgaattatctggcaggccgagactctcgtatcatcagcatggtg
gttgcggaagttcccctgtgggttatgcacagcagcaacgcgagttccaatactactctg
gacggtgccagcggactcgcaactggtggtcctttcaacaagctttcggatggacatttt
tcccgtcaccatcatttcgagcacaaggcggcttcttccttggccttgttggactcggcg
tcgggaagggcaagaaagtctgccatttacgccgtagacgtccatcccgacggccgaatc
tttgcgacagcgggaggcgactgtgcggtccgaatttggaatacacaggccttgtttgct
cccaaaaacaagggcggtagctttgctgtggcaggttcttcggatccgaccggcaaaccc
aacaatgctaccacaacctacgtgagcacgagtgcctcgtcgggaccggaagcctcggaa
agtagcgctggggaacaagaaagtgacgttggtccccgggacgaaatggttcacgatctt
aatagtttcgtccgtcgcaaaaaagaccccacagtgaaccaatcctcggcggtacccgcc
gagacgacgaaatcatctactgcatccgggcagtcggtagcggactcgtctcctgttcgc
ccctcgacgcacaaaagatcgcaccatcagcatcgtttactatgtacattgtccgcacat
tccggttcatcggtactggcggtgcgattttcaagtaccggaacctatttggcttcggcg
ggggatgacggttgtgtgtgtatctacactcacaacgaggacacggagggtaacctgacc
caagaaccgtcaccgcacgacgagcactggtctcggatcaaactttgcaggggacatggc
ttggatgttgtggatttggcttgggcaccggacgattcatacctagtttcctgttcgctg
gattccgaaacaccgatcattgtgtggaaaacgactcacttgggatcttctcgtcgagcc
aacgcaacgagtatgatactgaatccattcaaggttctcggtagaaaagaacacacgagt
acggtcaagggagtttctttcgatccggcaggatcctattttgcgtcctcgggtgatgat
ccagccgtctgcgtctggcgcgcgcacgatgattggggtttggaaaccaagattgacgct
agcagcggtatctttcggcgctggaaagaagacgatactatggccctgtcttcgcaaagt
cttttccgccgaattagttggtcaactgatggagcattcttgtgttccactaattcggta
gtgaagaacaagcacgtggcgtccactattagtcgcgatgggtggagtgtgagtagtgcg
tcttcggcggcagcgggagcggccaacctagtggggcataagcaaccagtggtcgtcagc
cgccacgcgtcgcagctgctgagtgcacgcaaagccaatgtttcaggaggccaaaacggt
gacgacgacgaagaacccgattacgcaactctgttggcactcggcgacaagcgaggcttc
gtaacgatctggagtaccaagaaatcacgtccgatttttaaacttcaatgcagtgaaagt
cgcagtacggtcactgacatggcctggggttccttaccaagaggggatctgatgctttta
gtaacatttttggacggtcaggttgtggccctgcgctttgaagtacccagtgagttggga
aatttgttgagtaaatctgaacgggcacgcgtatttcagctcaggtacggtatcgatgtg
aacgatgtggaaacttttggacagcgccatctatttacaggagcaagctcaggtcctaac
ctgatcgaaaacgctttgcaaatgacgttggagcacactcatactggaatagacgatatg
gacgatgatacctcgacaccaggtccggaaccagaagagagattgaatgacctgcaagcg
gtttcaattcgttcgaaacagaaggaaagcctctcgaaaggaaagaagcgcattcaacca
gttcttatggctgttaccagcaagaaaacgaagccaggagccgaacttctcaagaccaaa
gccgtcgagccaaaccaatccatcgatcctttgcagaatgctattgatgcagccagcaag
gcctcagccgccatggcaaccgccgattccaccaagcgcgacattactgtaaacgctgct
cccatggatggcctgtccggaacagcgcagtcaaattccgctcggccatcagtgcgaccc
aatggacctagctcttggatgggaacaattctgccgcacagctccgaacggatccattct
ctggatctcccgcttcttggtttacagtcaatggatgtcaccacaggattcgcagagcca
tgcgtcgccgaatgcaccaactcggtcaaattaccggtggggtcacggacaacatcaatt
ccatgtgtcgatgtagcattatctcgtgatggcaaaatatcgtggaaggatcaaatccct
ggtacatcatgctcggccattgcggccagtaccacgttaatggctgtcggaacaacggat
ggatgcctacaattgtatggcacatctcctacgatcggttggacatgtggtcagagcttt
cgttctcatccgtcgttagttcttgggcatcccattgtctcattgcaacttcaagagacg
cagggggaagacgacgaaatctttgctactttgctcaccttaacgggagatggtacattt
gccgtctactctgttcttccagtattgcaactacaattcaaaggatctgttatgccggcg
atgtcacacatggctttgggtacatcgttgacgtcggagcaacattcgataaaaatttcc
agaatacaaattactgaaaccaatcgtgtattactgcttctatcgctacagacagttgac
aacgcacagcttcgaggcggattgcgggggactactcaaattgacgcaggggttggtggc
tcgttgcaagcgtttgtcttcgaccaaaaggccgaactttggatgaaggcggcggacaac
cgctttgtcctttccgacttttacagtgctctaccgtctgcgaaatttagccccaatgga
gagctgtcaaggttggaagatgctgttcgaatcggcgcactccaagcgagcatgaagcca
gctcagcgcggtcgtctacgtgataccgaccgccatgcggacgagatgttttccagagcc
gatttggaatctgggaattttattccgactcgggcacattgcgaggatcgaatggcttgc
gctattgcactcgaatctgcggacgaattcaaaaaatggttatcattgtatataaaagta
ttgtgtgtggtggggcacactgattttctcagagttttggtggatatcttaatgaacgaa
cccaaggacaaacgagaaacgattcctgatggcatgtgctggtggatgtcgatcgcccct
acagtgttattcccgagatga
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