KEGG   Phaeodactylum tricornutum: PHATR_33540
Entry
PHATR_33540       CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K12877  protein mago nashi
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03013  Nucleocytoplasmic transport
pti03015  mRNA surveillance pathway
pti03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PHATR_33540
  09122 Translation
   03013 Nucleocytoplasmic transport
    PHATR_33540
   03015 mRNA surveillance pathway
    PHATR_33540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pti03019]
    PHATR_33540
   03041 Spliceosome [BR:pti03041]
    PHATR_33540
Messenger RNA biogenesis [BR:pti03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     PHATR_33540
Spliceosome [BR:pti03041]
 Complex C
  Other components
   EJC/TREX
    PHATR_33540
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 7203910
NCBI-ProteinID: XP_002186487
JGI: 33540
UniProt: B5Y5K5
LinkDB
Position
3:complement(1190042..1190509)
AA seq 155 aa
MTDPSPNDDFYLRYYVGHEGKFGREFLEFELYPSGKLRYANNSNYKDDDLIRKEVYVSPA
VVEEFRRLVEVSEITKVDDSKWKEPDERSTGHQELECKIGSHHIAFTACEIRSLGDIQKW
NDPEGLQTFYYLTLDLKALVMALISSHFKARPIPD
NT seq 468 nt   +upstreamnt  +downstreamnt
atgacagacccaagtcccaacgacgatttttacctccgatactacgtcggccacgagggc
aaattcggcagagaattcctcgagtttgaactctacccgtcgggaaagcttcgatacgcg
aacaactccaattacaaggacgacgatctgattcggaaagaagtctacgttagccccgcg
gtagttgaggaatttcgacgcctagtggaagtcagcgagattaccaaagtggacgatagc
aagtggaaagaacccgacgaaagatccaccggccatcaagagctagaatgcaaaatcgga
tcccatcatatcgcgttcacggcatgtgagattagatcgctgggtgatattcaaaaatgg
aacgatccagagggactccagacgttttactatcttacactcgatctcaaagccctggtg
atggcactcatttcgtcgcatttcaaagcgaggccgatcccggattga

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