Phaeodactylum tricornutum: PHATR_33633
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Entry
PHATR_33633 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pti03032
]
PHATR_33633
03400 DNA repair and recombination proteins [BR:
pti03400
]
PHATR_33633
Enzymes [BR:
pti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PHATR_33633
DNA replication proteins [BR:
pti03032
]
Prokaryotic type
DNA Topoisomerases
PHATR_33633
DNA repair and recombination proteins [BR:
pti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PHATR_33633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
MxiC_C
Motif
Other DBs
NCBI-GeneID:
7204073
NCBI-ProteinID:
XP_002186250
JGI:
33633
UniProt:
B5Y5U7
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All DBs
Position
3:1422369..1424825
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AA seq
818 aa
AA seq
DB search
MQYALSIIMGRAIPDARDGLKPVHRRILYAMDQLSLYPNTGHRKCARVVGEVLGKFHPHG
DMAVYDALVRLAQHFSTAYPLIDGHGNFGSIDADPAAAMRYTECRLTKLSQAALLEDLQD
DTVDFLPNFDGNEIEPAVLPAKLPILLLNGSSGIAVGMATNIPPHNLNEIMTACTALVKA
RQGGAAVTDKKLLQMVPGPDFPTGASILSTGGTEKLYTTGNGGIVMRAVTKIEKITTGRK
SSITRTAIIVTELPYQVNKAALLEKIAGLVNEKKLDGIADLRDESDRDGIRVVIELKRDA
VAAVVLNNLYKKTPLQTTFSGNFLALMTANRDSSSSLVPQRFTLRQAMDCFLDFRFETIR
RKSQFQLTKVNARSHIVAGLLMALDKVDMVIQIVRASADQQAAREALYIELGTSSEQTDA
ILKLQLGQLTRLNKGKLESEKADLEESRESLTHLLEVDDAVYDVMREEFIDMMKRFGGER
KSSIIVEDDGDFCDMDLIENSRSVIVVTRGGYIKRMPLKTFESQGRGTRGKRGTSDGGES
ADSEVAHCFTCNDHDTLLMVTQNGIAYGLRAYQVPIAGRTAKGQPIPSVLPVRGDEVITA
ILPVSEFSDEEYVVLTTEQGWIKRTPLDAFEKLSSRGLTIATLEDGDRLKWCHRVRNEDD
ILIGTVGGMATRFGAAKLRPTGRTSRGVRAMKLREGDTIADMNVLSGKNKEYILTVTAQG
YGKRIATSEFRAQARGGVGVIAIKFKRGQEEDKVSCLRIVKDDEEILVITARGIMVRQKA
SDIPSQGRSATGVMVQRVDDGDHISSVSIVPQYEEIDG
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgcgctttcgatcatcatgggtcgagccattcccgacgcacgcgacggtctc
aagcccgtacatcgccgaatattgtatgccatggaccagctttccctctacccaaataca
ggacaccgaaaatgcgcgcgtgttgttggggaagtcctgggcaagtttcatccgcacgga
gacatggctgtctacgatgctttggttcgcttggcgcaacactttagtacggcctatcca
ttgatcgacggacacggaaactttgggtccatcgacgcggaccccgctgctgctatgcgt
tacaccgaatgtcgcctgacaaaattgtcgcaagcggctttactagaagatttacaagat
gatacggtagactttttacccaattttgacggaaacgaaatagaacccgcagttttaccg
gccaagctcccgattctgctactcaacggttcgtcgggcattgcggttggcatggctacc
aacattccaccgcacaacctcaacgagattatgacggcctgtaccgccttggtaaaggcg
cgccaagggggcgcggcagtgacggacaagaagctcttgcaaatggtccctggacctgac
tttcccaccggggcgtcgattcttagtaccggcggtactgagaaattgtacacaacaggc
aatggtgggattgtcatgcgggcagtgaccaaaatcgaaaaaattacgaccggccgcaaa
agttccatcacacgaacggccataattgttaccgagctaccgtaccaggtcaacaaggcg
gcattgttggaaaagattgcgggactagtcaatgaaaaaaagctggacggtattgcggat
ctacgcgatgaatccgatcgtgatggaattcgggtcgtcattgagctcaaacgagacgcc
gtcgcggccgtagtcttgaacaacttgtacaaaaagacacccttgcagacaactttctct
gggaactttttggcgctgatgacggcgaatcgtgacagtagcagcagcctagtaccacaa
cgattcactcttcgccaagccatggactgctttcttgactttcgctttgaaacgattcgt
cgcaagtcacaattccaattgaccaaagtcaacgcccgttcccatattgttgcaggcttg
ttgatggcactggacaaggtcgatatggtcattcagattgttcgtgcttctgcggatcag
caggctgctcgagaagctttatacattgagctcggcacttcatcagaacaaactgacgct
attttaaaattgcaacttgggcaacttactcgattgaacaagggcaagctcgagtcggaa
aaggccgacctcgaagaatctcgtgaaagtttaacacatctcctggaagttgatgatgcg
gtttacgatgtcatgagggaagagttcattgacatgatgaagagatttggcggtgaacga
aagtcaagcatcattgttgaagatgacggcgatttttgcgatatggaccttatcgaaaac
tcgagatcggttattgttgtcactcgtggtggctacatcaaacgcatgccgttgaagaca
ttcgagagtcaaggaagaggcactcgcggcaaacgcggcacttccgatggtggagagtca
gctgacagtgaagtggcacattgcttcacgtgcaacgaccacgacacgctcttaatggtt
acccagaatggtattgcctacgggttacgggcgtaccaagttcctatcgcgggccgtacg
gcaaagggacagcccattccatccgtattgccagttcgcggtgacgaagttattacggcg
atcctcccggtgtccgagttctctgacgaagaatacgttgttctgacaacagaacaaggc
tggattaaacgaacaccgttggatgctttcgaaaaattgtcgagccgtggcttgaccatc
gctactttggaagatggtgatcgcttgaagtggtgtcatcgagttcgaaacgaggatgac
atcttaatcggcactgtaggtgggatggcgactcgattcggagctgccaagctacgaccc
actggtcgaacgagtcgaggcgtgagggcgatgaagctccgggagggcgacacaattgca
gatatgaatgtactcagtggcaagaacaaggagtacattttaacagtaactgcacaaggc
tacggaaagcgtattgcgacgagcgagttccgggcccaggctcgtggcggagttggtgta
attgccattaagtttaaaagagggcaggaggaggacaaggtaagctgcctccgaattgta
aaggacgacgaggaaatattggttattacagcaagagggataatggtccgacagaaagcg
tccgatattccgtcacaaggtcgatctgcgactggcgttatggtacagcgcgtggacgat
ggagaccacatatctagtgtgagcatcgtaccacaatacgaagaaattgacggctaa
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