Phaeodactylum tricornutum: PHATR_43884
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Entry
PHATR_43884 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K11793
cereblon
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pti04121
]
PHATR_43884
Ubiquitin system [BR:
pti04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PHATR_43884
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GFIT
Motif
Pfam:
Yippee-Mis18
LON_substr_bdg
Tachykinin
Motif
Other DBs
NCBI-GeneID:
7204341
NCBI-ProteinID:
XP_002186323
JGI:
43884
UniProt:
B5Y4N3
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All DBs
Position
3:complement(317666..319443)
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AA seq
550 aa
AA seq
DB search
MTSLSPLHHDSVGAGFDHQTDLERSHTSGIDEERFPCARDHSYLPGASHPLFPGNPRSIG
SLSYHSSTEGFKGQSGTGNLIEMAVLDLPRIVLFPGTTLPIRLHDRGWINYLGPEIDSSR
SSPGLKAEVQFGVITKQEPVVSAMMQRRQSWTRRGYGPDRLRRLSERVVAELGDLADLSE
EDEDAEGTPRIRAIDRVRYRPSSSLVPEHDLHSELSRQCRNENSPNGRIGTIATIVFTHG
DSSIDRATSSIRRLHNEELAFTAVGTRRFRIVSSVRELPTRNSFYNQHVPRYIIEMLDDR
PLTRPRFGVNLLPRKSVSLRRVERELVGLSRVSPIPEFVYKTTWPWKLVLDILETMEKSM
SLAGLLDGLKATSGNIEGSQRHLTEPLQFSFYMASNLPIARDEKLALLELSTVERLRSIL
QIVARAECEDSVIHCKTCTTQVSQSSQMFSVGGAEGTIGAYVNEHGCVHQTITSRKVKEE
EVWYTGDPQTKDSWFPGYSWTIMSCGFCGDHLGWKFVKVARTEPKNLSRPDCFYGLSTAN
IKTLHRPVGS
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgttgtcaccgttacaccacgatagcgttggagctggatttgatcaccagact
gatctagagcgatcccataccagtggaatcgatgaagaacgctttccttgcgctagagat
cattcctaccttcccggggcttcgcacccccttttccccggaaatccacgctcaatagga
tccttatcctaccactcatctacagagggattcaaagggcaatcgggaaccggaaatttg
atcgaaatggcggtactggacttgccaagaattgttctgtttccaggtacgactctgcca
ataaggttgcacgatcgtggttggatcaactacttgggccccgaaattgacagcagtcgc
tcatcccctgggttaaaggccgaagtccagtttggagtcataacgaagcaagaacctgtt
gtctcggcgatgatgcaacgaaggcaatcttggactcgacgaggatacggacccgatcgt
ttgcggcgactgtcggaacgtgtggtggcagagctgggggatcttgctgacttgtcagaa
gaggacgaagatgccgaaggcacacctagaattcgagcaatagatagagtcagataccgg
cctagtagctccctcgtccctgaacacgaccttcatagcgaattgagtcgccagtgcaga
aatgaaaattctcccaacggaaggataggaacaattgcgaccatcgtgttcacacacgga
gattcatcaatagatagggcgacttctagtattcggcgcctacacaatgaggagcttgcc
tttaccgctgttggtacacgccgatttcgcattgtttcttcagtaagagaactgccgacg
agaaactcattttacaaccagcacgtgccacgctatattattgaaatgttggatgacaga
cctctgacaagaccacggtttggcgtgaacttattacctaggaagtctgtttctctgaga
cgagtagaaagggaactcgtggggctgtctcgagtttcccccattcctgagtttgtatac
aagaccacatggccctggaaacttgttttagacatacttgagaccatggaaaaatcaatg
agcttagcagggttactcgatggattaaaggctaccagtggaaacatagaagggagccag
aggcatcttaccgagccgctccagttttccttctatatggcatccaatttaccaattgcc
agagacgaaaagctcgctttactagagctgagtaccgtagaacgattgcggtcaattctt
cagattgttgcgagagcagaatgtgaagactccgtgattcattgtaaaacttgcacaacg
caagtctcacaatcgtcgcaaatgttttctgttggcggagccgagggcacgataggtgca
tacgtcaatgaacacggctgcgtgcaccaaactataacttcaagaaaagtaaaggaagaa
gaagtttggtatacgggcgatccgcaaacgaaagactcttggtttcctggatatagctgg
accataatgtcttgtggtttttgtggcgatcatttggggtggaagtttgtcaaagtcgca
aggacggaaccgaagaatttgtcgcgtcccgattgcttttacggcttgagtacagcaaac
atcaaaactctacaccgccctgtcggatcttga
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