Phaeodactylum tricornutum: PHATR_44165
Help
Entry
PHATR_44165 CDS
T01075
Name
(RefSeq) hypothetical protein
KO
K06675
structural maintenance of chromosome 4
Organism
pti
Phaeodactylum tricornutum
Brite
KEGG Orthology (KO) [BR:
pti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pti03036
]
PHATR_44165
Chromosome and associated proteins [BR:
pti03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
PHATR_44165
Condensin II
PHATR_44165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-GeneID:
7203906
NCBI-ProteinID:
XP_002186196
JGI:
44165
UniProt:
B5Y5J8
LinkDB
All DBs
Position
3:1166545..1171002
Genome browser
AA seq
1356 aa
AA seq
DB search
MDDDPSTSLSPPATPSLVEDVTPVKLRNGENETPPRLMISKMELENFKSYAGVKTIGPFH
KCFSAVVGPNGSGKSNVIDAMLFVFGKRAKKLRLNKVSELIHKSQDHSDCVSARVSVYFQ
EIIDTGPGDTDYVVVPKTDCVVTRVARQDNSSTYKIQGKSCQFKDVAAYLDSKGIDLDNN
RFLILQGEVEMISMMPPKGKTDQDEGLLEYLEDIIGSNKYLEQTNEAALQVEALSELRQE
KLNRVKAVEKEKDNLQAAKLEAEALLGKDREIRRKQNVLYQIHAAHASRDAQHATLQQTA
AATKLDAARQKLQAANDRVHEIENGHAAQKLAYEKIHAELVQTKEEFAAYERRDIKLREE
IKHEKAQRKKLVAKMASEAQKHEQAVQKGQDATEAIPTLEQEIVTLTDDKATEDAKLEDI
YEAMKGVTQQLRGELETKTQELAPVHQERAVFQARLDTALTQVQLLEGSTTRAKEKLLQA
ETELASINQTQQSKREELIAAQDELQQAQERITQAEGEETVLATKEVQISQRNKDLLARA
EEAKAALQSKGGGRSSAVKGVLQAARKGGELGNVGVLGRLGDLATIPEDYDVAVSTACGM
LDHIVVQTTAGAQRCLEFLRKHGLGRANFIPLDKMKKGAHDRVVETPEGARRLFELIQPS
NFAILPAIFLGVGDTLVAPDLETATRWAYEFGKRWRVVTLDGKLIETAGTMSGGGKSLRR
GGMRLANARSKSTADSTADEEESMDCQKLQDEATKAQELLQQVRLRRKELTDEVRGLKKR
VKALEVVLPKLAMEIEGCDTTRKNLTESIPGLRAQSELSQKDAAKLVDLTREVEKCKTDM
ASCSMLASKLETEVARLQKAILDAGGTKLKKQQAACEKVLSVLNDAEKALNSAKVAITTS
EKAATKAEKNKAAAEEQLEKCKVLLGEKAAEFKALEEDAFHVMQAFEKVKEVEAEKREAL
EAVSKESEELRKSQSEVKFVEVDLVGQVDAFAKQISDAEKKIQHWSNEIEKLRAVANDDD
DFDMSDDEEEEVSTKLKHDIVDEAEDVDMEDDSNVANADTERQPLEKIPKSSLPTLSEAA
LRQYNKDEIKEEITVLETERNAIAKNANMGAIAEYRKKEADYLARVTELDGVSEERNAVR
KTHEELRRLRLEMFMDGFGQITLKLKEMYQMITLGGDAELELVDSLDPFSEGIVFSVRPP
KKSWKNISNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVANYIKERT
KNAQFIIISLRNNMFELADRLVGIYKTNNATKSVTINPRAFGVDAQQNGQIPTTPALSER
TNAGGADRSASAVKDTSVRRRVPFEGSSEDVKISEA
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatccttcgacgagtctcagccctccggcgacgccatctttggtggaagac
gtgacgccagtcaaacttaggaacggagaaaatgagacgcccccgcgtctcatgattagc
aaaatggaactggagaatttcaagtcctacgccggcgtcaaaacgattggaccctttcac
aaatgcttttccgccgtggtggggccgaacggttccggcaagtcgaacgtcattgacgcc
atgttgttcgtcttcggcaagcgcgccaagaaactccgcctcaacaaggtctcggagctt
atccacaagtcgcaggatcacagtgactgtgtctcggcgcgggtctcggtatatttccag
gaaattatcgataccggccccggtgataccgattacgtcgtcgtcccgaagacggactgc
gtcgttacacgcgtcgcccgtcaggacaattcatccacctacaagattcagggaaagtcc
tgtcaattcaaggacgtcgcggcctacctagacagtaaaggtattgatctagacaataac
cgctttctcattcttcaaggagaagtcgaaatgatctccatgatgccacccaagggaaag
actgatcaggatgaaggtttactcgaatacctggaagacatcattggaagcaacaagtat
ctcgaacaaaccaacgaagcggcactccaggtggaagccttgtcggaactccgtcaggaa
aaactcaaccgtgtcaaagccgtagaaaaggaaaaggacaatctccaggcggccaaactc
gaagccgaagccttgctcggcaaagatcgcgagatccgtcgcaagcagaacgttctctac
caaatccacgccgctcacgcctcacgggatgcgcagcacgccaccttgcaacagaccgcg
gccgccaccaagctcgacgccgcccgccaaaaactccaggccgccaacgaccgcgtccac
gaaattgaaaacggacacgccgcgcagaaactcgcctacgagaaaattcacgcggaactc
gtacagaccaaggaagagttcgccgcctacgagcgtcgggatattaagctacgcgaagaa
atcaagcacgagaaagcgcaacgcaaaaagttggtggcaaaaatggccagtgaggcacaa
aaacacgagcaagccgttcaaaaggggcaggatgcaaccgaggccattccaacgttggaa
caagagattgtcactctgacggatgacaaagcgacggaagatgccaaattggaggacatt
tacgaagccatgaaaggcgtaacacagcagcttcgtggcgagctcgaaactaaaacgcag
gaactcgcgcccgtccaccaggaacgcgccgtctttcaagccaggctcgacaccgctctg
acgcaggttcaattgttggaaggctctaccacgcgagcgaaggaaaaactgcttcaggcc
gaaaccgaactcgcttcgattaatcagacgcagcagtcgaaacgggaggaactcattgcg
gcacaagacgaactccagcaggcgcaggaacgtatcacgcaggcggaaggcgaagaaacg
gtcctcgctacaaaagaagtccaaatctcccaacgtaacaaggatttgttggcccgcgcc
gaagaagcaaaggctgcattgcagtccaagggcgggggtcgatcgagtgcggtcaaagga
gttctgcaagcggcacgcaagggaggtgagctcgggaatgttggtgtcctcggtcgtctc
ggagatctggccacgattccggaagactatgacgtggccgtttccaccgcttgtgggatg
cttgatcacattgtggtacaaacgacagcgggtgcgcagcgctgcctcgagttcttacgc
aaacacggactgggccgcgcaaactttattcctctcgataagatgaaaaaaggagcgcac
gaccgagtcgtcgagactccggaaggcgcccgtcgcttattcgaactcatccagccttcc
aattttgctattcttcccgcaatctttctcggcgttggtgatactttagtagctccggat
ctcgaaaccgccacacgctgggcctacgaattcggtaaacgttggcgcgtagtcacactg
gatggcaagttgattgaaacggcgggaaccatgtcgggaggtggcaagagccttcgccgt
ggtggtatgcgattggccaacgctcgttccaagagtaccgcagatagtactgcggatgaa
gaagaatccatggattgccaaaagttgcaagatgaagccacaaaggcccaggagctgttg
cagcaggttcgcttgcgccgtaaggaacttacagacgaggtccggggactgaaaaagcgt
gttaaagctctagaggttgtcctccccaaacttgccatggaaattgagggatgcgatacg
acgaggaaaaacttgacagagtcgatccctggtctccgcgcgcagtctgaactgagccaa
aaggacgccgccaaactcgtcgaccttacccgtgaagtggaaaagtgcaaaacagacatg
gcatcgtgttccatgctggcctccaaactcgaaacagaggtagctcgtctccaaaaggct
attctagatgctggtggaacaaagctcaagaagcaacaagctgcgtgcgaaaaggttttg
tctgtcctcaatgatgcggagaaggcgctcaactcagccaaggtcgctatcacaacgtct
gagaaagctgcgacaaaagccgaaaagaacaaggctgcagccgaagagcagctcgaaaag
tgcaaggtcttgttgggagaaaaggctgccgaattcaaagcgctcgaagaggatgctttc
cacgtcatgcaagcattcgaaaaggtcaaagaagtggaggccgaaaagcgtgaagcacta
gaagccgtctcgaaggaatcggaagagctgcgaaagtcacagtccgaagtcaaatttgtg
gaagttgatctcgttggtcaagttgacgcctttgcaaagcaaatttccgacgccgagaaa
aagattcaacactggtccaacgagatcgaaaagctacgcgccgttgccaatgacgacgac
gactttgacatgtcggacgacgaagaagaggaagtgtcgacgaagctaaagcacgacatt
gtcgacgaagcagaggatgttgatatggaagacgacagcaatgtagcaaacgccgatacg
gaacgacaaccgctcgaaaaaataccaaagagttcgttgcccaccctctccgaagccgca
ttgcgacaatacaacaaagacgaaatcaaagaagaaatcacggtattggaaacagagcga
aatgcgattgcgaagaatgccaatatgggggccattgccgaataccgtaagaaggaggcc
gattaccttgcccgagtcaccgagctggatggcgtatctgaggagcgcaacgccgtacgc
aagactcatgaagaacttcgtcggctgcgtttagaaatgtttatggatggcttcggacaa
attacgttgaaactgaaggaaatgtatcaaatgattacccttggaggcgatgcagagttg
gagcttgtcgattcgctcgatccgttttccgaaggtattgtcttttcggtacggccacca
aaaaagtcttggaaaaacatcagcaacttatccggtggcgaaaaaacactgtcatcgctg
gctttggtctttgccctgcatcattacaagccaactcccttatacgtaatggacgaaatc
gatgccgcccttgactttaagaacgtttcaatcgtggcgaactacatcaaagagcggacc
aagaatgcacaatttattatcatctccctgcgcaacaacatgttcgagcttgcggatcga
ctagtaggaatctacaaaacaaacaatgccaccaaatctgtcaccattaatccacgagct
tttggtgtcgatgcccagcagaatggacaaattccgacgactccggcgttgtcggaacga
acaaatgcgggcggagccgaccgatccgcttcagccgtaaaggacacatcggtacggcga
cgagttccgttcgaggggagttcggaggatgtcaaaatttcggaagcctaa
DBGET
integrated database retrieval system
