KEGG   Phaeodactylum tricornutum: PHATR_54175
Entry
PHATR_54175       CDS       T01075                                 
Name
(RefSeq) hypothetical protein
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
pti  Phaeodactylum tricornutum
Pathway
pti03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pti00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PHATR_54175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pti03021]
    PHATR_54175
Transcription machinery [BR:pti03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     PHATR_54175
SSDB
Motif
Pfam: RPC5
Other DBs
NCBI-GeneID: 7204398
NCBI-ProteinID: XP_002186098
JGI: 54175
UniProt: B5Y504
LinkDB
Position
3:634049..635389
AA seq 420 aa
MSVRIKNEEQLGVVQSTEHDDDDQVVREIDVFLSPALTNLFHLLQYPLQHTPVTHPSAAR
IKHRHGILELDQPLPMSIERSGLFHMQHRTYRSQTVPVQTHVCMGKLQDDPLGKTSLHLV
PLTHASQMRPTFQHVDAMDDPHAELNIEEDDDVDDDKTMEKKPVVFQRKESERAAIARKS
SYAFKKASEEGEEWQQLEVSLPDTELQRTLLNDVVCADLGTFALLPSEQQASLLDPDISY
VNSLDYMPPQAGQLYAHLEGKDIKTVVSKLTVLMTRGWPIPYSILRAQFSSQIADEALLH
ALSVCAVMVRGIFCLNSKLLNLDEPLQRARTFILYLLHSHGSIYRTKLDRVFVGYKDVSS
QRLLEILKQVGKKIQSCWVLKVPDDEHFLKDYAATSALHELYWQRQSIRYSSLLQVYNMP
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgtcagtcagaataaaaaatgaggagcagcttggcgtcgtgcaaagcacagagcatgat
gacgacgatcaagttgttcgtgagatagatgtcttcctttcgcccgcgttgaccaaccta
tttcatctcctccaataccccttgcagcatacgccagtgacacatccttcagccgcccgt
attaagcatcgacatggcattcttgagctggaccaaccattgcccatgtcaattgagcgt
tccggattgttccacatgcaacatcgtacgtatcgcagccaaaccgttcctgttcagaca
catgtctgcatgggaaagctacaagacgacccactcggcaagacttctctgcatttggta
ccactgacgcacgcgagtcaaatgagacccacgttccagcacgtggatgcaatggacgac
ccacacgctgagctaaacatcgaagaggacgacgacgttgacgatgacaagacgatggaa
aagaagccagttgtttttcagcggaaagagtcggagcgtgctgccatagcccgaaagtca
agctacgcattcaagaaagcaagtgaggaaggcgaagaatggcaacaactagaggtaagt
cttcctgatacggaattgcaaaggaccttgttaaacgacgttgtatgcgcggatctcgga
acgttcgcgttgctgccgtctgaacagcaagcatctttgttagacccggacatttcgtat
gtcaatagccttgattacatgcctcctcaggctgggcaattatatgctcatcttgaaggt
aaagatatcaagacggttgtctccaaattgacagtcctaatgacaagaggctggccgatc
ccatattcaattttacgagcccaattttcatcgcaaatagctgacgaggctctcctccac
gccttgtcagtatgcgcagtgatggttcgtggaatattttgcttgaactctaagttgctg
aacttggatgagcctctgcaaagagcaaggacatttattttgtatctcttgcatagccac
ggatctatataccgtaccaaacttgaccgagtatttgttggatacaaagatgtttcatcg
cagcgtctgctggaaattttgaagcaagtcgggaaaaagatccagtcttgttgggttttg
aaagttccagatgacgagcattttttaaaagattatgctgcgacttcggccttacatgaa
ctttattggcagcggcagtcaattcgctactctagtttgctccaggtatataacatgccc
taa

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