Paenibacillus tianjinensis: JRJ22_00105
Help
Entry
JRJ22_00105 CDS
T07842
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03030
DNA replication
ptj03430
Mismatch repair
ptj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JRJ22_00105 (holB)
03430 Mismatch repair
JRJ22_00105 (holB)
03440 Homologous recombination
JRJ22_00105 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptj03032
]
JRJ22_00105 (holB)
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_00105 (holB)
Enzymes [BR:
ptj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JRJ22_00105 (holB)
DNA replication proteins [BR:
ptj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JRJ22_00105 (holB)
DNA repair and recombination proteins [BR:
ptj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JRJ22_00105 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
Mg_chelatase
WHD_UFL1_5th
Motif
Other DBs
NCBI-ProteinID:
QSF45141
UniProt:
A0ABX7LB50
LinkDB
All DBs
Position
23695..24669
Genome browser
AA seq
324 aa
AA seq
DB search
MPFHDILSQEDAKRLLQNALRKDAVSHAYLFTGPAGSGQMSTALMFAQAIFCTKLKDDAC
GECLECRKVEHGNHPDLTLLKPDGASIKIDQIRELQRVFSYRSEGVNPKVYIIEGADKMT
VQAANSLLKFLEEPPAPAVGILISDNSSSLLPTIQSRTQRIPFSPLHPDIMLQALSGEGV
PVPLARCAVSLTSGLDGCRELLAQNWFAEMRNLVLQLAKESMGKGSSAVATAGQKLFKTG
LGEHLDTLFSMFHLWFKDMLYFLYRRHESIVFIDQLDFISRHARQRSTEQWVAYMEFAAE
SSRRLRSNANAQLCLEQFLIRLES
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcatgatatattaagccaggaggatgccaaacgcctgctgcagaatgcactg
cgcaaggatgcagtcagtcatgcgtatttgttcaccggcccagccggaagcggacagatg
tcaactgcactcatgtttgcccaggcgatattttgcacaaagcttaaggatgatgcctgc
ggggagtgcttggaatgccgcaaggtagagcatggcaaccatccggatctgactttactg
aagcctgacggggcaagtattaagatcgatcagatccgtgagctgcagcgtgttttttcc
taccggtctgaaggagttaatccgaaggtttacattatagagggagcggacaaaatgacg
gtgcaggccgccaacagtctgcttaaatttttggaagagccgcctgctccggcagtcggt
attctgatctccgataatagcagttccctgcttccaaccatccagtcgagaacccagcgt
atccctttcagcccgctgcatcctgatattatgcttcaggctttgtcgggggagggggtt
ccggtacccctggcacggtgtgcagtatcactgacttcagggctcgatgggtgcagggaa
cttttggcacagaattggtttgcagaaatgagaaatctagtgttacaattagcaaaggag
tctatgggcaaaggcagctctgcagtggcaacagccggacagaagctgttcaagaccggg
ctcggtgaacatttggatactcttttcagcatgttccatctttggtttaaagatatgctc
tacttcctgtaccgaagacacgaaagcatcgttttcatagatcagttagactttatttcc
agacatgcccgtcagcggagtacggagcaatgggtggcttatatggaattcgcagcggag
agtagtcgcaggctccgttctaatgctaacgcccaattgtgtctggagcagtttttaatc
cgattggaaagttaa
DBGET
integrated database retrieval system
