Paenibacillus tianjinensis: JRJ22_00535
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Entry
JRJ22_00535 CDS
T07842
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K21464
penicillin-binding protein 2D [EC:
2.4.99.28
3.4.16.4
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj00550
Peptidoglycan biosynthesis
ptj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JRJ22_00535
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ptj01003
]
JRJ22_00535
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ptj01011
]
JRJ22_00535
Enzymes [BR:
ptj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JRJ22_00535
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JRJ22_00535
Glycosyltransferases [BR:
ptj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JRJ22_00535
Peptidoglycan biosynthesis and degradation proteins [BR:
ptj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JRJ22_00535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QSF47558
LinkDB
All DBs
Position
complement(109353..111422)
Genome browser
AA seq
689 aa
AA seq
DB search
MPRDSAKPKVKRHRLRRLVRLLAAMAVLFLLAAGALLGYLYNKPLPPIDDDIRSKLLDSR
GNVLTTFTTDGRSRDPVALNQIAPQLIQATLAVEDRKFYDHSGFDLKGMARAVLANVEAG
KRTQGASTLTQQLARNLYLTHEKTWTRKSKEALYTMQLEMKYSKNEILNMYLNEIYYGHG
AYGIEAAARMYFGKAAADLTLAESAMLAGIPKGPTYYSPYTHLENAKKRQGIILSAMVEV
GDITAVQARAAAQETLSFKPQGQKNTTVLAPYFRDYVRGLVLDTLHISSDELELGGLNVY
TTLDPDMQQAAEEAVDKEMDAASELETALVSIDPRTGYIKAMVGGKNYRTNQFNHALATT
RQPGSSFKPIMYLTALSSKTMTGLSVFNSQPTLFHYDNNRKTYQPKNFGDKYLGEINMRQ
AIAASDNIYAVNTIMKIGADKVAEMAARMGIDSPLQSVPSLALGTSPVSPLEMASAFAVI
GGGGIRQPATAILKITDSKGNLIYEAPQDQGEKVVEPAAAYVLTRLMEGVFESGGTGNRV
ASIIKRPVAGKTGTTDTDGWMVGFTPELSTAVWVGYDKGRDIATSDGRRAAPIFAEFTEK
ALANVPPKIFPIPDGVVSVYINPQSGKLATAACPEKELETFISGTEPTEYCDQHGTGGET
APAEGSPGTADPGKEEHSLWNDIKRWWMN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgattccgctaaacccaaagtcaagagacaccgcctccgccggctggtccgg
ctgctggccgccatggccgtactgttcctgctggctgccggagcactactaggctatcta
tacaacaaaccgcttccgccgatcgacgatgatatccgctccaagctgctcgattcccgg
ggtaatgtactgaccacgtttaccacggacggacgcagccgggaccctgttgcactgaac
cagatcgccccgcagcttatccaggctaccctggccgtggaggaccggaaattttatgat
cattccggttttgacctgaaaggaatggcacgggctgtgcttgccaatgtggaggcggga
aaacgcacgcagggagccagcaccctgacccagcagctcgcgcgcaatctttatcttacc
catgagaagacgtggacccgcaaatcaaaggaagccctttacacgatgcagctggagatg
aagtacagcaaaaatgaaattctgaacatgtatttaaatgaaatctattatggtcatggc
gcatatggaattgaagcggcggcccggatgtatttcggcaaagcagctgcagatcttact
ctggcagagagtgcaatgcttgccggaattcctaaagggcccacctattattcaccgtat
acccacctggagaatgccaagaaacggcaaggcatcatcttatcagccatggtagaggtg
ggtgacatcacagccgtacaagcccgggcggcagcacaggagaccttaagcttcaaaccg
cagggccagaagaataccaccgttctcgcgccttatttccgtgattatgtgcgcgggctt
gtcctggatacactccatatcagcagtgatgagctggagcttggcggactgaatgtctat
accacccttgatcccgatatgcagcaggctgctgaggaggccgttgataaagaaatggat
gccgccagtgaactggagacagcgctggtatccatcgatccccgcaccggctatatcaag
gcaatggtgggcgggaaaaactatcgcaccaaccagttcaatcatgctctggcgacgacc
cgccagccggggtcatcctttaaaccaatcatgtatttaactgccctctcttcaaagacg
atgaccggcctgtcggtattcaacagccagccgacgctgttccattatgacaataaccgc
aaaacctaccagcccaaaaatttcggcgataaataccttggggagatcaatatgcgccag
gctatcgccgcttccgacaatatctacgcggtaaatacgattatgaaaataggcgcagat
aaagtcgcagaaatggccgcccggatgggaatcgacagcccgctgcaaagcgttccttcc
ctggcgctcggcacttctccggtaagtccgctggagatggcctctgccttcgctgtgatc
ggcggcggaggcatcaggcaaccggcgactgccatcctcaaaattaccgattccaaaggt
aatctgatctatgaggctccgcaggatcagggagaaaaggttgtggagccggcagcagcg
tatgtcctgacccggctgatggaaggggtctttgagagcggcggcacaggcaaccgcgta
gcatcaattattaagcgtcctgtggccggaaagacaggaacgactgatacggacggctgg
atggtcggatttacgcccgagctgtccacagcggtctgggtaggatatgacaagggccgc
gatatcgctacgtccgatgggcggcgggccgcaccgatatttgctgaattcacagaaaaa
gcgctggccaacgtgcctccgaagatttttcccattcctgacggggtggtcagcgtgtat
atcaatccgcaatccggcaagctcgccacagctgcttgtcctgaaaaagagctggagacc
ttcatcagcggcacagagcccacggagtattgtgaccagcacggcaccggcggggagact
gctccggctgaaggctccccaggtacagctgacccgggcaaggaagagcattctctgtgg
aatgacatcaaacggtggtggatgaactag
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