Paenibacillus tianjinensis: JRJ22_00630
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Entry
JRJ22_00630 CDS
T07842
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03030
DNA replication
ptj03430
Mismatch repair
ptj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JRJ22_00630 (dnaX)
03430 Mismatch repair
JRJ22_00630 (dnaX)
03440 Homologous recombination
JRJ22_00630 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptj03032
]
JRJ22_00630 (dnaX)
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_00630 (dnaX)
Enzymes [BR:
ptj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JRJ22_00630 (dnaX)
DNA replication proteins [BR:
ptj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JRJ22_00630 (dnaX)
DNA repair and recombination proteins [BR:
ptj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JRJ22_00630 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
DnaX_C
RuvB_N
AAA_30
AAA_22
TIP49
RCF1-5-like_lid
AAA_5
AAA_16
AAA_assoc_2
AAA_19
AAA_14
B12-binding_2
Rad17
AAA_2
Mg_chelatase
DUF815
DUF6395
PIF1
TsaE
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QSF45235
LinkDB
All DBs
Position
132374..134152
Genome browser
AA seq
592 aa
AA seq
DB search
MEHIALYRAWRPQSFQDMVGQQHIIQTLQNAIREQRVSHAYLFSGPRGTGKTSAAKVLAK
AVNCERGPGPEPCNECPSCLRITAGNVMDVQEIDAASNRGVEEIRDLRDKVKYAPTEVRR
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHKLPATIISRCQRFDFRRVSL
EEQSGRLAEICQKEGITADADALQYIARLSDGGMRDALSILDQISSFTDGNVTYQKVLGM
TGGIPSEQFARLATAILEGDMGRLLELVEQLMQEGKSADKCLENLLYYFRDLLMIKMVPG
ADQLTDRVLNPAEFRDMAAAFSRERLFQIVETLNRYLGEMKYATHPQTLFEVALMKLCSM
QQEAGPSLHATAPVAGAIRVEPSTGGQAADAGELEVLKRQIAALEKKLEQAIQSGGVSGG
GRDAAPAPRASAASSAPRISSPSKLPPQLGKFIAGKDNPDFAAVYKQWSLVLQGVKEEKV
TVHAWFVDGEPVSVMEDAVLVAFKNTIHRDTTEKPANRQVIENVFAARLGKPYRLVTIMQ
RDWNEAAQKSVAQPGTEELRLEHEHEEAEAKTEPWIDEAIQLFGEDLVVIKE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtggaacatatcgcgctgtaccgtgcttggcggccgcagtcgtttcaggacatggtaggg
caacagcacattatccagacgctgcagaatgcaattcgtgaacagcgggtttcgcatgcc
tacctgttcagcggcccgcgcgggaccggcaagacgagtgctgccaaagttttggccaaa
gcagtcaattgcgagcggggacctggcccggagccatgcaacgaatgtccttcctgccta
aggattaccgcgggcaacgttatggacgtgcaggagattgatgcggcgtcgaaccgcggg
gtggaagaaatacgcgacctgcgggataaggtgaaatatgcacctaccgaagtgcgccgt
aaagtgtatattattgatgaagtgcatatgctgacaacagaagcgttcaacgctctactt
aagacgctggaggaaccgccgccgcatgtcatgtttatactggcgacgacagaacctcat
aaattgccggctacgattatttcacgctgtcagcgctttgacttccgccgtgtatctctg
gaggagcagagcggtcggctcgctgagatctgtcagaaggagggcattactgcggatgca
gatgctctgcagtatatcgcccgtctctctgacggagggatgcgtgatgcgctgagtata
ctggaccagatctcctcctttacagacggtaatgtaacttatcagaaggtactgggcatg
actggggggatcccttccgaacagtttgcccgcctggcaacagccattctggaaggtgat
atgggccggctgctggaactggtagagcagctgatgcaggaaggcaagagtgcggacaaa
tgcctggagaacctgctttattacttcagggatttgctgatgatcaaaatggtcccgggg
gctgatcaattaacagaccgggtactgaatccggctgaattccgggacatggcggctgca
ttttcacgggagcggctgtttcagattgtagaaaccttaaaccgctatcttggagaaatg
aaatatgcgacacatccgcagacattgtttgaagtagcacttatgaagctgtgcagcatg
cagcaggaagccgggccatccttgcatgcgaccgcaccggtagccggtgctatacgggtt
gaaccgtcaaccggtggtcaggctgcggatgcgggagaattagaggttttgaagcggcag
attgctgctttagagaagaagctggaacaggccatacagtcgggaggagtctcgggcggt
ggacgcgatgcagcacctgcaccgcgggcatctgcagcaagctcggctccgcgtatctcc
tctccttccaagctgcctccgcagcttggcaaattcatcgccggcaaggataatcctgat
ttcgcggcggtttataagcagtggagtctggtgctgcagggagtcaaagaggagaaagta
acagtacacgcatggtttgttgacggtgagccggtgtccgttatggaggatgcggtgctt
gtagcgtttaagaacacaattcaccgcgatactaccgagaaaccggccaacaggcaagtg
atcgagaatgtgtttgctgcacgccttggcaagccttaccggctggtgacaatcatgcag
cgggactggaatgaggccgcccagaagtctgtagcccaaccgggcacagaggaattacgt
ctggagcatgagcatgaagaagccgaggcgaagaccgaaccatggattgacgaggctatc
cagctctttggagaagaccttgttgtcataaaagagtaa
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