Paenibacillus tianjinensis: JRJ22_01760
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Entry
JRJ22_01760 CDS
T07842
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03420
Nucleotide excision repair
ptj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JRJ22_01760
03430 Mismatch repair
JRJ22_01760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_01760
Enzymes [BR:
ptj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JRJ22_01760
DNA repair and recombination proteins [BR:
ptj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JRJ22_01760
MMR (mismatch excision repair)
Other MMR factors
JRJ22_01760
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
YdjO
AAA_30
AAA_12
DUF6953
Motif
Other DBs
NCBI-ProteinID:
QSF45420
UniProt:
A0ABX7LB92
LinkDB
All DBs
Position
complement(404679..407009)
Genome browser
AA seq
776 aa
AA seq
DB search
MNKLLFHNIPLGATGERIPQAAIASARTSREMVKPEESDAAYFRRLEEGGILLNQPQIAA
VRHHQGPLLTLAGAGSGKTSVLICRTGYLLSVRGISPSRMLLLTFSSKAAAEMRERIALL
PGVEESDAARLQARTFHSFFLYFLRRQGLRQDIFHETRRQHILLKQIMRELGLPKDAYPP
EMLLALLSSCKMNMGEAENLPEGTTAEQEMKAILVLYEQWKTDNFKIDFDDVLLIAYKML
REQSALLQELQQKFQYVMVDEFQDTNALQYELVKMIAHPQHNLMVVGDDDQTIYSFNGAR
SEFILEFEKLYPGAKVITLDINYRSGPAIVGLGNGIIRHNLRRRSKTLQAAKNNGSQPRY
LRPQTADEEAEQIVEHIVSQVDSGNREYRDFALLYRASSSNRAVLELLLLRDIPYVDYGE
GQLLYEHWLISPVLDHLRLSLNRRNFAAMENILPTLYMSREKGMDHIRRMEAVQPKQGPL
IHLLSLPGMEDFKGAKLRDRLELIRGLAALTPVQAIRQIRTNFYDYFIEANERHQATLHR
ETLKEMLDELESSAERFDSIPVFLEFIANITERNELSRQPGLKEQGNRIALMTIHKSKGL
EFPVVFLIGASEGILPHSSALEGERLKDRKTAKPPAAGAFKTHSESGFAALEEERRLAYV
AVTRAREELFISSPARHRGKKAEVSRFMLSAFRAAAAPSRPAPASVAATRTGVSRSYSSG
SGANVRMHTVPVWNCTGTSCPGWTRMKAGGAEDHLASKPCPLCSSPMEKSTREVPV
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcttttatttcataatataccgctgggcgcaaccggtgagcgcattccccag
gcggccatcgcttcagcccggaccagccgcgagatggtgaagccggaggaaagtgatgcc
gcttatttccgcaggctggaagaagggggcatactgctcaatcagccgcagattgcggca
gtacgccatcatcaggggccgctgctgacactggccggggcaggctccggtaaaacctcg
gtgctgatctgcaggaccggctatttgctgtcggtacggggcatctcgcccagccggatg
ctgctgcttaccttctcgagtaaggcggctgcagaaatgcgtgagcgtatcgccttgctg
cctggtgttgaggagagcgatgccgcccgtctccaggcccgcacgttccactcctttttt
ctctatttcctgagaagacaaggactgcggcaggacatctttcatgagacacgccgccag
catatcctgctgaagcagattatgcgggagctggggctgccgaaggatgcctatccgccg
gaaatgctgctcgccctgctctcttcctgcaagatgaatatgggcgaagcggagaatctg
ccggagggcacaaccgcagaacaggaaatgaaggcaatcctggtcctgtacgagcaatgg
aaaactgataatttcaaaatcgatttcgacgatgtgctgctgatcgcatacaaaatgctg
cgggagcagtccgcgctgctgcaagagctgcagcagaaattccagtatgtcatggtcgac
gaatttcaggatacgaatgcgttgcaatatgagctggtcaaaatgatagcccatccgcag
cataatctgatggttgtcggcgatgatgaccagacgatctattcattcaacggcgcgcgc
agtgagttcatccttgaattcgagaagctctacccgggcgccaaggtaatcacgctggat
atcaactaccgctccggcccggctattgtcggccttggcaacggcatcatccgccataac
ctgcggcggcgctccaaaaccctgcaggccgccaaaaacaacggcagccagccccggtat
ctgcgcccgcagactgcggacgaggaagccgagcagattgttgaacatattgtcagccaa
gtggacagcggaaacagggaataccgcgattttgccctgctctaccgtgcctctagcagc
aaccgggcggtgctggagctgcttctcctgcgggatatcccctatgtggattacggggaa
ggccagctgctctacgagcactggctgatctcaccggtgctggatcacctgcggctgtca
ctgaaccggcgcaacttcgcggcgatggagaacatcctgccaaccctctatatgagccgg
gaaaaaggcatggaccatatccgccggatggaggccgtccagcccaagcaaggaccgctg
atccatctcctgtcgctgccaggcatggaggatttcaaaggcgctaagctgcgggaccgg
ctggagctgatccgcggtctggcggcgttaacaccggtgcaggcaatccgccagatccgc
acgaacttctatgactatttcattgaagccaatgaacggcaccaggctacactgcaccgt
gagacgctcaaggaaatgctggacgagctggaatcctcagcagaacggttcgacagcatc
ccggtcttcctcgaattcattgcgaacattaccgagcggaatgagctgagccgccagccc
ggcctgaaggagcagggcaaccggattgcgctgatgaccattcacaaatccaagggactg
gagttccccgttgtcttcctgatcggcgcatcggaaggcattcttccccacagttcggcg
ctcgaaggcgagcggctgaaggaccggaagactgccaagcctccggcagccggggccttc
aagacccacagtgagtccggctttgccgcactggaagaggaacggcggctcgcctacgta
gccgtcactagggcccgggaggagctgttcatcagctcaccggccagacaccgggggaag
aaagcggaagtctcccgctttatgctgtccgccttccgcgcagcagccgccccttcccgg
cccgcgcctgcttctgtggcggcaaccagaaccggcgtgtccagatcgtattcctccggc
agcggagcgaatgtacggatgcataccgttccggtctggaactgtaccggcacaagctgc
cccggctggacccggatgaaggcaggcggggccgaggatcatttggcctccaagccctgc
ccgctgtgcagctcgcccatggagaaaagcacccgggaggtgcctgtgtaa
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integrated database retrieval system
