Paenibacillus tianjinensis: JRJ22_05560
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Entry
JRJ22_05560 CDS
T07842
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JRJ22_05560 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptj03019
]
JRJ22_05560 (recQ)
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_05560 (recQ)
Enzymes [BR:
ptj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JRJ22_05560 (recQ)
Messenger RNA biogenesis [BR:
ptj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JRJ22_05560 (recQ)
DNA repair and recombination proteins [BR:
ptj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JRJ22_05560 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
Helicase_Sgs1
Cas3-like_C_2
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSF46086
UniProt:
A0ABX7LDV0
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All DBs
Position
1260092..1261927
Genome browser
AA seq
611 aa
AA seq
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MKMQAPTMEQAQAELQKYYGYPDFRDGQKKIVQHLLEGGDTLGIMPTGGGKSICYQVPAL
LMPGLTLVISPLISLMKDQVDALTTAGIPAAYINSTLSGKEVNERIRAARRGELKLLYVA
PERLELDWFRLEMAGLSISCVAVDEAHCVSQWGHDFRTSYLAVSPFVEELPQRPILAAFT
ATATPEVMEDMVRLLRLRQPGVFMTGLGRDNLAMSVLRGENKREFVLDYTASHSHQPGIV
YAATRKEVDDLYQRLQASGIAAGRYHAGMSDQERADSQEKFLYDDIRVMVATNAFGMGID
KSNVRYVIHYNMPKNMEAYVQEAGRAGRDGEPSECILLFSAQDIMTQKFLIEQNPQDPER
KANEYRKLQQMIDYCYTTRCLRSAQLEYFGEDNEDKLCGICSSCTDERELVDMTVDAQKI
FSCIHRMRERYGVALVASVLKGSRNQKVLQYGFEKLPTHGAMSSRTEKEITESINVLISE
GYLALSEGQYPVVRLQPLAAEVLRGQREVMQRVARPLLTGGSGSGRSRSRSYDLSPSAVN
ETVFEQLRLIRRELAGREHVPSYIIFNDATLREMSVVCPQTEAEMLRVKGVGEVKYRKYG
KPFLEFFQNEM
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcaagcacctactatggaacaggcgcaggctgaactgcaaaaatattacggt
tatcccgatttccgggatggccagaaaaaaatcgtgcagcatttgctggaaggcggcgat
acgctggggatcatgccgaccggcggaggcaaatcgatctgctaccaggttccggcgctg
ctgatgccggggctgacgctggtcatttcaccgctgatttcactgatgaaggatcaggtg
gacgcccttacaacggcgggtatcccggctgcctatatcaacagcaccctgagcggcaaa
gaagtgaatgaacggatccgcgccgcgcgccggggcgagctgaagctgctgtatgttgcg
ccggagcggctggagctggactggttccgcctggaaatggcaggcttgtccatttcctgc
gtcgccgtagatgaagcgcactgcgtctcgcagtgggggcatgatttccgtaccagctat
cttgcggtatcgccgtttgtggaagaactgccgcagcggccgattctcgcggcctttacg
gcaactgctacgccggaggtcatggaggatatggtccggctgctgcgtcttcgccagccc
ggcgtgttcatgaccgggctgggccgggacaatctggcgatgtcggtgctgcgcggagag
aacaaacgcgagtttgtgctcgattataccgccagtcactcccaccagccgggcattgtg
tatgctgcaacccgcaaggaggtcgacgatctgtaccagaggctgcaggcctcaggaatc
gcagccggacgctatcatgccggaatgagcgaccaggagcgggcggacagccaggagaag
ttcctttatgatgatatccgggtcatggtggcgaccaatgccttcgggatggggatcgac
aaatccaacgtacgttatgtcatccactacaatatgccgaagaatatggaggcatatgtc
caggaggccggacgtgccggccgggacggggaaccgagtgaatgtattctgctgttcagc
gcacaggacattatgacacagaagttcctgatcgagcagaatcctcaggatcctgaacgc
aaagccaatgaataccgcaagcttcagcagatgattgattactgctacaccacccgctgt
ctgcgcagtgcgcagctggagtattttggggaagacaatgaggacaagctctgcggaatc
tgcagctcctgcacggatgaacgcgagctggtggatatgacagtggatgcgcagaagatt
ttctcctgcatccaccggatgcgggaacggtatggcgtggcgctggttgcttccgtgctg
aagggttcacgtaaccagaaggtgctgcagtacggcttcgagaagctgccgactcatggt
gcgatgtccagccggacggagaaagagattaccgagagcatcaatgtgctgatctcggaa
ggttatctggcgctgtcggaaggccagtatccggtcgtgcggctgcagccgctggccgcc
gaggtgcttcgcggccagcgtgaggtgatgcagcgtgtcgcccgtccgctgcttaccgga
ggttccggctcaggacggagccgcagccggagctacgatctttcgccgtctgcggtcaac
gagacggtgttcgagcagctgcgcctgatccgccgcgagctggcggggcgcgagcatgtg
ccgtcctatattatttttaacgacgctactctgcgtgagatgagtgtggtttgtccgcag
accgaagcggaaatgctgagggttaaaggtgtcggtgaagtgaaataccggaaatacggc
aagccgtttctggagttttttcaaaatgaaatgtaa
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