Paenibacillus tianjinensis: JRJ22_05930
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Entry
JRJ22_05930 CDS
T07842
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
ptj
Paenibacillus tianjinensis
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptj03019
]
JRJ22_05930
Messenger RNA biogenesis [BR:
ptj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JRJ22_05930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QSF46149
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All DBs
Position
1340049..1341005
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AA seq
318 aa
AA seq
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MTLIKQLSPQDEFVGFYLLRELTLKQTNGTPPKDYFDIVLGDSSGQLSAKYWDVSTTDKE
TFFPMALVKVRGIAHTYREKLQIKITKIRLANESDGVSLTDFIRSAPIRPVDLIHTIKGA
MASIMDQEISTLVAFCVGKVEEKLMHYPAAKTHHHAYFAGLAYHMVRMLEIGDFLCKQRP
FLNPDLMKAGIILHDIAKPEEMISQFGIVSDYSVQGKLIGHISMASNWITEAAIRSNIDL
ESEKVLALQHLVLSHHNLGEWGSPVQPQTAEAVALHHIDAMDAKLQMVEDALDTTPETEE
WTPFIRGLENKAVYRLKL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgacacttattaaacagctatcaccacaggatgaattcgtcggcttctatctgctcaga
gagctgacgctgaaacaaacaaacggtactcctccaaaggattattttgatattgtactc
ggtgattccagcggccagttatcggccaagtattgggatgtcagcacgacggataaagaa
actttttttccgatggcactggtcaaagtacgcggcattgcccatacctaccgtgaaaaa
ctgcagatcaagatcaccaagatacggctggctaatgagtccgatggtgtgtcattgacc
gatttcatccgttcggcccccatccgtccggtggatctaatccatacgatcaaaggtgcc
atggccagtatcatggatcaggaaatttcaacattagtcgcgttttgtgtaggtaaagtg
gaagagaagctgatgcattatccggcggctaaaacccaccaccatgcgtatttcgccggg
cttgcttatcatatggtacggatgctggaaatcggagatttcctgtgcaagcagcgcccg
ttcctgaatcccgatttgatgaaagcggggattattttacatgatatcgccaaaccggag
gaaatgatctcccagtttggaattgtctcggattacagtgtacaaggcaagcttatcggg
catatctcgatggcctccaactggattacagaggcggcgatccgctctaacattgatttg
gaatctgaaaaggtgctggcgctgcagcatctggtgctgtcgcatcataatttgggggaa
tggggcagccctgttcagccgcagacagcggaggcggtagccctgcatcacattgatgct
atggatgccaagctgcagatggtggaggatgcgctggatacaacgcctgaaaccgaagaa
tggacaccttttatccggggactggaaaataaggcggtataccgtctgaagctgtaa
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