KEGG   Paenibacillus tianjinensis: JRJ22_09765
Entry
JRJ22_09765       CDS       T07842                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ptj  Paenibacillus tianjinensis
Pathway
ptj03030  DNA replication
ptj03430  Mismatch repair
ptj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ptj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JRJ22_09765
   03430 Mismatch repair
    JRJ22_09765
   03440 Homologous recombination
    JRJ22_09765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptj03032]
    JRJ22_09765
   03400 DNA repair and recombination proteins [BR:ptj03400]
    JRJ22_09765
Enzymes [BR:ptj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JRJ22_09765
DNA replication proteins [BR:ptj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JRJ22_09765
DNA repair and recombination proteins [BR:ptj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JRJ22_09765
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QSF46816
UniProt: A0ABX7LHZ6
LinkDB
Position
2247870..2248619
AA seq 249 aa
MKEPNKGGGFWNNLRQGGMPSAIASMRGGESAQQTAQQMAFIRSLMREKRRPEVLHTPLS
ELETVIFDLETTGFSHQHGDEIMSFGAIRVVGEEIKEDECFYTLVNCQTSIPDNITRLTG
ISEEMTSSAPSLIDGLHNFMSFVGQRVLVAHGSAHDKAFLNAALWKTSKVQLTHRVLDTM
MLARWLEPHRSNYTLDELLAVHEIPIEGRHNALEDAKMTARLWVSYLREISQKRQVETLG
DLYAYLSRA
NT seq 750 nt   +upstreamnt  +downstreamnt
atgaaggagccaaacaaaggcggaggattctggaataatctgaggcaaggcggaatgccc
tccgccattgcatcgatgagaggcggggaatcggcacagcaaaccgcgcagcaaatggcc
tttatccgatcactcatgcgcgagaagcggcgacctgaagtactgcataccccgctttcc
gaactggagacggtcatattcgatctggaaacgaccgggttctcacatcagcatggcgat
gaaattatgtcctttggagcaatccgggtagtcggtgaagaaatcaaagaagatgagtgc
ttttacacacttgtgaattgccagacgtcgataccggacaatattacaagacttactgga
atttccgaggagatgacatcatccgcgccttcattgatcgacggccttcataatttcatg
tcgtttgtaggccagcgtgtgcttgtggcacatgggagtgcgcatgacaaagccttttta
aacgctgcattgtggaaaacctcaaaggtacaacttacccacagggtactggacacgatg
atgctggcccgctggctggagccgcaccgcagcaattataccttggatgagctgctcgcg
gttcatgaaatccccatcgaagggcggcataacgccctggaggatgctaagatgactgca
cgtttatgggtgtcttatctcagggaaatttcgcagaaacgccaggtggagacgctggga
gatctttatgcttacttgagcagagcgtag

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