Paenibacillus tianjinensis: JRJ22_10910
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Entry
JRJ22_10910 CDS
T07842
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03022
Basal transcription factors
ptj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRJ22_10910
09124 Replication and repair
03420 Nucleotide excision repair
JRJ22_10910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptj03021
]
JRJ22_10910
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_10910
Enzymes [BR:
ptj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JRJ22_10910
Transcription machinery [BR:
ptj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JRJ22_10910
DNA repair and recombination proteins [BR:
ptj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JRJ22_10910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
SNF2-rel_dom
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QSF47025
LinkDB
All DBs
Position
2481081..2482778
Genome browser
AA seq
565 aa
AA seq
DB search
MTGTGSCIIRKDKTILLECGHPEFEAARTALADYAELVKSLPAYHTYRITPLSLWNAASG
GRTAEEIIASLQGLSRWGTPAGLEEEIRRLISRYGRLELHAHVTDNRLMILRTDLPALLD
ELGEFLVLSGLQLNRSGLMECECPAVNRGLLKQELTRLGYPVIDMAGYREGQRLNLAWKE
KEFHEGASKAEVFGLRDYQWEAVRLFHGSGGSGVVVLPCGAGKTVVGLAVLEKLQCETLI
LTSSTTSVGQWREELLQRTNLEEEEIGEYTGERREVRPVTLATYQMLTHRSSKGGPFVHM
NLFKERNWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGREGDVFSLIGPRC
YDLPWKSLEQQGWIAAVECVEVIVPMEPALRSRYIYAGGKEQFRLAAGNPAKAEEAEKII
AAHSGAAVLVIGQYLDQLEAVADFLDAPLITGKTPQRERNKLYAAFNEGSLKVLVVSKVA
NFAVNLPDASVAIEVSGAYGSRQEEAQRLGRILRPKPGENKAYFYTLVTGDSREQEFAMR
RRLFLTEQGYEYAIRAGDQQKEAVL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgactgggacagggtcatgcattatccgcaaagacaaaacaatcctgctggaatgcggc
catccggaatttgaagcggcgagaacggcacttgctgattacgccgagcttgtgaaaagt
cttcctgcctaccacacctaccggatcacacctctgtcgttatggaacgcagcatccggc
ggaaggacagctgaagagattattgccagcctccagggattgtcccgatgggggacaccg
gccgggctggaggaagaaatccgcaggcttatttcccggtatggaagattggagctacat
gcccatgtgacggacaaccggctcatgattcttcgcacagatttgcctgctttgctagat
gagctgggagaatttctggtgcttagcgggctccagttgaacagatccgggctcatggaa
tgtgaatgtcctgcggtgaatcggggactgctgaagcaggaactgaccagactcggatat
cctgtaatcgacatggcaggctaccgggaaggccagagactgaaccttgcctggaaggaa
aaagaattccatgaaggtgcttctaaagcagaggtcttcgggcttcgggattaccagtgg
gaagcagtccgcctatttcatggcagtggcggcagcggtgttgttgtcctgccctgcggg
gcaggcaagacggtggtcggacttgccgtgctggagaagctgcaatgcgaaacgctgatc
ctcacttcgagtacaacatctgtgggacaatggcgggaagaactgctgcagcggacgaat
ctggaggaagaggaaatcggggaatataccggtgaacgcagggaagtgcggcctgtcaca
ctagctacttatcagatgctgacacaccggagctctaagggcggtccgtttgttcatatg
aacctgttcaaggagcgtaactgggggctgatcatctatgatgaggtgcatttgctcccg
gctccggtgttccgggctaccgctgacatccaggcgacacgccgcctggggctgactgca
actctcgtcagggaagatggccgtgagggagatgtcttctccctgattggcccccgatgc
tacgatcttccgtggaagtcgctggagcagcagggatggattgcggctgtggaatgtgta
gaggtcattgtgccgatggagcctgccctaaggagccgttatatttatgccggagggaaa
gagcagttcaggcttgctgcagggaatccggctaaggctgaagaggcggagaagattata
gccgcgcattccggagcggcagtgctcgttatcggccaatacctggatcagttagaggct
gtagcggacttcctggatgcccctttgataaccggtaaaacgccgcagcgggaacgtaat
aagctgtatgcggcatttaatgaggggagcctcaaggttctggtggtgtctaaggttgct
aattttgccgtgaatctgccggatgcctcggtggcaatagaggtttcgggcgcttacggc
tcgcggcaggaagaggctcagcggctgggcagaatcctgcgccctaaaccgggtgagaac
aaggcgtatttctacacacttgtaaccggtgacagccgggaacaggaatttgctatgcgg
cgcaggctgtttctgaccgagcaggggtatgaatatgccattagagcgggagaccagcag
aaggaggcggtactatga
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