Paenibacillus tianjinensis: JRJ22_16300
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Entry
JRJ22_16300 CDS
T07842
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JRJ22_16300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptj03019
]
JRJ22_16300
Enzymes [BR:
ptj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JRJ22_16300
Messenger RNA biogenesis [BR:
ptj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JRJ22_16300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
SUa-2TM
Motif
Other DBs
NCBI-ProteinID:
QSF42861
UniProt:
A0ABX7L5G5
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All DBs
Position
complement(3614666..3616180)
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AA seq
504 aa
AA seq
DB search
MTFNELDLNPAILKALSLENYTSPTPIQEEAIPAALAGRDVLGCAQTGTGKTAAFSLPII
QLLSKQPAITSGKRRIRSLILTPTRELALQIYENIQAYSKFTGIRSTAIVGGVSQKAQER
ALSQGADILIATPGRLIDLIAQKHVDLQYVQILVLDEADRMLDMGFIHDVKRIIAKMPSK
KQTLFFSATMPSEISQLIKTLLVNPVKIEITPVSSTVDRIEQSVYLLQNGNKQNQLNRLL
QDKSIVSALVFTRTKRGADRVTRDLAKINITAQAIHGNKSQNDRQNALRNFKSGATRVLV
ATDIAARGIDIDELSHVINFNLPNIPETYVHRIGRTGRAGMSGVAISLCEEEEIPYLKDI
QKLIGKTIPEVKEHDYPMSKSTPALLNDRPAKAPAKPAAKSKANPPRKPKSEWFTQGNKP
KSGTNGQASPDSGSRSGGRVSGSANDRPAGARSAGAGKAGAGAKGSQGNRSGGYAKGSQG
NRPGSQSSPNRNGNKAPVNAGRTQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgacttttaatgagctcgatttaaacccagcgattctcaaggcgttaagcctggaaaac
tatacatccccaacaccgattcaggaagaagcgatacctgcagctctggccggtagagac
gtactgggctgcgcacagaccggaacaggcaaaaccgctgctttttctttgcccatcatc
cagctgttaagcaagcagccggctattaccagcgggaaacgccgcattcgttcgctgatt
cttacccctacccgggagctggcgctgcaaatctatgaaaatatccaggcctacagcaaa
ttcaccggtatccgttctacagccattgtcggcggtgtatcgcaaaaggcgcaggagcgg
gcgttaagccagggagcggacatactaatcgctacaccgggccggctgattgatctgatt
gcccagaagcatgtggacctgcaatatgtgcagattctggtgctggatgaagccgaccgg
atgctggatatgggctttattcatgacgttaaacggattattgccaaaatgccaagcaaa
aagcaaaccttgttcttctccgcgacgatgccgtcggagatttcacagctgatcaagacg
ctgctcgtgaatccggtgaaaattgagattaccccggtatcttccacggtagaccgtatc
gaacagtctgtgtatttgctgcaaaacggcaataagcagaatcagctgaaccgactgctg
caggacaaatcgattgtgtcggcactggtctttacccgcactaaacgcggcgctgaccgg
gtaacccgtgatttggccaaaatcaatattacagcacaagcgattcatgggaacaagtcg
cagaatgaccgccagaatgcgctgcgcaatttcaagagcggtgcaacccgcgtgctcgtg
gcaactgacatcgctgcccgggggattgatattgatgagctgtcccatgtcatcaacttc
aacctgccgaacattccggaaacctatgtccaccgtattggccgtaccggccgtgcagga
atgagcggagttgccatttcattatgtgaagaggaagagattccttacctgaaggatatc
cagaagctgatcggcaagacgattccggaagtcaaggaacatgactatccgatgtccaaa
agcacaccggccctgctgaatgaccgtccggctaaagcaccggctaaaccggctgcaaaa
tccaaagcgaatccgccgcgcaagccgaaatcggaatggttcacgcaagggaacaagccg
aagagtggaactaacggtcaagccagtccggactcgggcagcagaagtggcggccgggtt
agcggaagcgcaaacgacagaccagccggagcaagaagcgcaggagcaggcaaagccggc
gcgggtgctaaaggttctcaagggaacagatctggcggatatgccaaaggatcgcagggt
aatagaccgggcagccagtcaagcccgaaccgcaacggtaataaagctccggtaaatgcc
ggcagaacgcaataa
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