Paenibacillus tianjinensis: JRJ22_16470
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Entry
JRJ22_16470 CDS
T07842
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptj
Paenibacillus tianjinensis
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptj03016
]
JRJ22_16470 (truB)
Enzymes [BR:
ptj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JRJ22_16470 (truB)
Transfer RNA biogenesis [BR:
ptj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JRJ22_16470 (truB)
Prokaryotic type
JRJ22_16470 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QSF42893
LinkDB
All DBs
Position
complement(3651770..3652684)
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AA seq
304 aa
AA seq
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MSELTGVLAVYKPAGYTSHDVVAKARRILGMKRIGHTGTLDPQVTGVLPLCLGRATRVVE
YIQELPKEYVATLRLGLSSDTEDMTGTITETVDEVHVTEAEVLEVLNSFKGVISQVPPMY
SAVKVDGKRLYELAREGKTVERKSREVEIYEIEMTDMVWNGNHPDITFRVLCSKGTYIRT
LCVDIGRALGLPGVMVELTRTMSAGISASHCLTLEQIAEHKEAGTLEQHLIAADEAISHL
PRHSVIDEKKKAAMQGQRLSIRYVAPEVKQGGDFRLYDLQGEFLGIYKLEDTGAIAPVKV
FAQG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactcacaggtgttttggcggtctataagcctgcaggatacacttcacatgac
gttgtagccaaagcccggagaattctcggtatgaaacggattggtcatacgggtacactt
gatcctcaggtgaccggagtgcttccgctttgtcttggacgggctacccgggtggtggaa
tatatccaggagctgcccaaggaatatgttgcgaccctcagactcggcttatccagtgat
acagaagatatgactggtacgattacggagacggtggatgaagttcatgttaccgaagcc
gaagtgcttgaggtgctgaactcgttcaaaggagtgatctcccaggttccaccaatgtat
tcggcggtcaaggttgacggtaagcgtctttatgagctggcccgagaaggcaaaacagtc
gaacgcaaaagccgtgaagtggagatctatgaaattgaaatgacggatatggtctggaac
ggcaatcatcctgatattactttccgtgtattgtgttcgaagggcacttatatccgtaca
ctatgtgtggatattggccgtgcgcttggacttcccggtgtaatggtcgagcttacgcgt
acgatgtctgccgggatttctgccagccattgcctgaccctcgagcagattgctgaacat
aaggaagcaggcacacttgagcagcatttgattgcggcagacgaggccatatcccatttg
ccgcggcactccgtgatcgatgagaagaagaaggctgccatgcagggtcaacgtctttcg
atccggtatgtggcacccgaagtgaagcagggcggtgacttccggctttacgatcttcag
ggagaattcctgggtatttacaagctggaagatacgggggctattgcacctgttaaagtc
ttcgcacaaggttaa
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