Paenibacillus tianjinensis: JRJ22_23240
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Entry
JRJ22_23240 CDS
T07842
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj00521
Streptomycin biosynthesis
ptj00523
Polyketide sugar unit biosynthesis
ptj00541
Biosynthesis of various nucleotide sugars
ptj01100
Metabolic pathways
ptj01110
Biosynthesis of secondary metabolites
ptj01250
Biosynthesis of nucleotide sugars
Module
ptj_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JRJ22_23240 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JRJ22_23240 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JRJ22_23240 (rfbC)
Enzymes [BR:
ptj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JRJ22_23240 (rfbC)
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Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSF44107
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All DBs
Position
complement(5009183..5009743)
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AA seq
186 aa
AA seq
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MKLTETMLPGVFIVEPAVFGDHRGWFMETFSDAKFKEQGIDTAFVQDNQSYSAAKGTLRG
LHYQLNPKAQTKLVRCTRGSIFDVAVDIRRGSPSYGKWYGVELSAENKKQLLIPKGFAHG
FMTLTEDVEVQYKCDELYAPECDGGILWNDPSIGIEWPIHVTPVLSGKDEKAPLLREANL
NFTYDL
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaacggaaacgatgcttccaggcgtatttattgtagagcctgctgttttcgga
gatcatcggggatggtttatggaaaccttcagtgatgccaaattcaaagagcaaggtatt
gatactgcttttgtacaagataatcagtcctattctgctgcgaaagggacgctgagaggt
ctccactaccaattgaatcccaaagctcagactaagcttgtccgttgtacgcgtggttct
atttttgatgtggcagtggatattagaagaggaagtccctcttacgggaagtggtatggg
gtagagcttagtgcagagaataagaagcagctactgattccaaaagggttcgctcatggt
tttatgacgcttaccgaagatgttgaggttcaatataaatgtgatgagctttatgcgcct
gaatgcgacgggggaattctttggaatgatccatctatagggattgaatggcctattcat
gttactccggtactttccggcaaagatgagaaggctcctttactgagagaggctaatttg
aattttacttatgatctttag
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