Paenibacillus tianjinensis: JRJ22_27495
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Entry
JRJ22_27495 CDS
T07842
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ptj
Paenibacillus tianjinensis
Pathway
ptj03022
Basal transcription factors
ptj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
JRJ22_27495
09124 Replication and repair
03420 Nucleotide excision repair
JRJ22_27495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptj03021
]
JRJ22_27495
03036 Chromosome and associated proteins [BR:
ptj03036
]
JRJ22_27495
03400 DNA repair and recombination proteins [BR:
ptj03400
]
JRJ22_27495
Enzymes [BR:
ptj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JRJ22_27495
Transcription machinery [BR:
ptj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
JRJ22_27495
Chromosome and associated proteins [BR:
ptj03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
JRJ22_27495
DNA repair and recombination proteins [BR:
ptj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
JRJ22_27495
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
QSF44843
UniProt:
A0ABX7L9L3
LinkDB
All DBs
Position
complement(5924702..5927023)
Genome browser
AA seq
773 aa
AA seq
DB search
MQYEVFSLSVRTLVEYVFSSGSLEPGFRSGAAMAEGTRIHQHIQKQYKEGDRKEVYLKTE
IPHEGLLFVIDGRCDGLLTGENGSVTVEEIKSTAELLEPDFAGRDVHWAQALMYAYMICL
EQGLSGIEVKLTYVRRGGEEQQSLYRNVTREELCAFAADTVAKYAPYAELMVRHGNKKEI
SIRQLPFPFPAYREGQRHFAAAVYKSVSEGVNLFAQAPTGIGKTMSTLFPALKALGEGKA
AGLFYLTAKTVNRLAAQAAIAMLVDQGLHLHAITLTAKDKACFREEGLCSKEFCPYREGY
YDRINTALLDMLEHETLMTQEVIASYARKHEICPFEFSLDAAYACDAVICDYNYIYDPRI
SLKRLPEERKKKTVLLVDEAHNLVDRGREMYSASLSKAPFLTLQRQYKSGNKALSAAAKA
VNAFFIGLRKSCSEAGEGEWSSYPEELPALLEAFALEAETELLSPSLPLLAPPGEDEDGD
GEGLLDTYYSVQGMLRTFKTYDERYITYAEVQRGDVYLKLFNLDPSYLLQQMGKSFRSQI
LFSATLSPLSYYRDMLGAREEDYSLMVPSPFHKEQWQVSVLPVSTRYRDREDSLFPLCDA
LKGMTARKGNYLVFFPSYAYLQNVYALFTEKYPEVSTLVQSTGMSEPDRESFLASFRPEN
PQTLLGFAVLGGIFSEGVDLPGDRLNGVMVVGVGLPQVGLERNLLRAYFQSQGKNGFDYA
YVYPGMCKVLQAGGRLIRSESDNGTIILADDRFLQQPYRGLLPEEWRDYLVMT
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgaggtattttccctttcggtaaggactttggtggaatatgtgttcagcagc
ggcagtctggagccgggattccgcagcggtgcggcaatggcagaagggacacgtattcat
cagcatatccagaagcaatataaggaaggagaccgcaaggaggtctaccttaagacggag
attccccatgaagggcttctattcgttatcgatggacggtgcgacggcctgttaactgga
gagaatgggtccgttacggtggaagagattaaatctacggccgaactgctggagccggat
ttcgcaggacgggatgttcattgggcgcaggcacttatgtatgcctacatgatttgtctt
gagcaggggctatccggtatagaagtgaagcttacctacgtccggcgcggcggtgaggag
cagcagagcctgtacaggaatgtcacgcgggaggaactgtgcgccttcgctgcggataca
gttgccaagtacgctccttatgcagagctgatggtccgccacgggaacaagaaggagatc
agcatccggcagttgccgtttccttttcccgcttaccgggagggacagcggcatttcgct
gctgcagtgtataaatcggtttcggagggcgtcaatctgtttgcacaggcaccgaccggc
atcggcaaaaccatgtctacgctctttccggcgctgaaagcgctgggggaaggtaaagca
gccgggctgttctatctgacggccaagacggtgaaccggctggctgcccaagcggcgata
gctatgctggtcgatcaggggctgcatctgcatgccattacacttacagccaaggacaag
gcctgcttccgtgaggagggcctctgcagcaaggagttctgcccctatagagaaggttat
tatgaccggattaatacggcgctgctggatatgctggagcatgagactctgatgacacag
gaggttattgcgtcgtatgccaggaagcatgagatctgcccgttcgagttctcgctcgat
gccgcctatgcctgcgatgcggtcatttgcgactataactatatctatgatcccaggatc
agccttaagcggctgccggaggaacggaagaagaaaacagtcctgctggtggatgaagcg
cataatctggtagaccgcgggcgtgagatgtattcggcaagtctgtccaaggcgccgttt
cttacgctgcagcggcagtataaatcgggtaataaagccctaagcgcagcggccaaagcc
gtcaatgccttcttcatcggcttgcgcaaaagctgcagtgaagcaggtgaaggggaatgg
agcagctatccggaggagcttccggctttactggaggcctttgctctggaagcggagact
gagctgctgtccccctctctgccgcttcttgcaccgcccggggaagacgaagacggagat
ggagaagggctgctggatacgtattattcagtacaaggcatgctgcgcacgtttaaaacc
tacgatgagcggtatataacttatgctgaggttcagcgcggggatgtatatctcaagctg
ttcaatctggacccttcctacctgctgcagcaaatgggcaaaagcttccgcagccagatt
ctgttctcggcaacgctgtcccccctctcatattacagggacatgctgggggcgcgggag
gaggattacagcctgatggttccttcgccttttcataaggaacaatggcaggtatccgtg
cttccggtttccacgcggtaccgggaccgggaggattccctgttcccgctctgtgatgcg
ctgaagggaatgactgcgcgtaaaggcaattatctcgtgtttttcccttcctatgcttat
ctgcagaatgtatatgcgctgtttaccgagaaatatccggaggtctcaacgcttgtgcaa
agcaccggtatgagcgaaccggacagggagagcttccttgcctccttccgcccggagaat
ccgcagaccctgcttggcttcgccgtgctgggcgggattttctcggagggggttgatttg
ccgggcgaccgcctgaacggtgtaatggtcgtaggtgtcgggttgccgcaggtagggctt
gagcgtaacctgctgcgcgcgtatttccaatcccagggtaagaacggcttcgattatgcc
tatgtctacccgggcatgtgcaaggtgctgcaggcggggggccggctgatccgcagcgag
agtgacaacggaacgattatactggcggatgaccggttcctccagcaaccttaccggggg
ctgcttcctgaggagtggcgggactaccttgtcatgacgtaa
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