Pseudomonas tructae: EXN22_04805
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Entry
EXN22_04805 CDS
T07857
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EXN22_04805 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_04805 (recD)
Enzymes [BR:
ptk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EXN22_04805 (recD)
DNA repair and recombination proteins [BR:
ptk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXN22_04805 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
AAA_16
SLFN-g3_helicase
AAA_17
AAA_28
TraI_hel_assoc_N
NTPase_1
T2SSE
nSTAND3
AAA_5
Motif
Other DBs
NCBI-ProteinID:
QBF25040
UniProt:
A0A411ME57
LinkDB
All DBs
Position
1061281..1063362
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AA seq
693 aa
AA seq
DB search
MSRSLDDLLPTPLDARHLAALAPLSKGEDLLALLDRWVERGWLRALDRAFVSFLGEREPG
GEPLVLLAAALASHQLGHGHVCLDLQATLAEPDFALSLPPEGDALAGPLLLPSQLLERLE
LDTWLQQLRRSRLVAQGNSEQDSARPLVLNGQRLYLRRYWAYERRIDNALRERLQQVEPT
PADLTARLGQLFESAAPSGQVDWQKLACALATRSAFSIITGGPGTGKTTTVVRLLALLQS
PAVEAGRPLRIRLAAPTGKAAARLTESIGQQVERLAVAADVRQNIPTDVSTVHRLLGSRP
GSRHFRHHAGNPLPLDVLVVDEASMIDLEMMANLLGALPPHARLVLLGDKDQLASVEAGA
VLGDLCRDAEAGRYSPQTQAWLEQVSGAPLVGSELLPGTVDEYPLAQQVVMLRFSRRFGE
GSGIGQLARLVNRQEADQARALLNQKQDDVFALSLRSEQDRTFDRLLLEGLGRGSDGPQG
YRSYLQTLRQQRPPLATPVDDPRWETWALQVLQGFETFQLLCAVRKGPWGVEGLNQRVSR
VLGGAGLIDSEQPWYEGRPVLMTRNDYGLGLMNGDVGIALRLPDEQHEGQQVLRVAFARN
DGKGGVRFVLPSRLNEVETVFAMTVHKSQGSEFTHTALVLPDTLNPVLTKELIYTGITRA
KTCFSLIEPRLGVFEDAVRRKVKRISGLMLEQV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtagcctcgatgacctgttgccgacgccactggatgcccgccatctggccgca
ctggcaccattgagcaagggcgaggacctgctggccttgctcgatcgctgggtcgagcga
ggctggctgcgagccctggaccgcgccttcgtgagttttctgggggagcgcgaacctggt
ggcgagcctttggtgctgctggcggcggccttggccagtcatcaactgggccacggccat
gtctgcctggacctgcaagcgacgttggccgaaccggattttgccctgtcgttgccgccc
gaaggcgacgccctggccgggcctttgctattgccgtcgcaattgcttgaacgcctggag
ctcgacacctggctgcagcagctgcgccgcagccgcctggtagctcagggcaacagcgag
caagacagcgcgcggccactggtgctcaatggccagcgcctgtacctgcgccgttactgg
gcttacgagcgtcgaatcgacaacgccttgcgcgagcgcctgcagcaggtcgagccaacc
ccggcggatctgacggcacgcctggggcaattgttcgaaagtgctgccccgagcggccag
gtcgactggcagaagctggcctgcgccctggccacccgcagtgccttcagcatcattacc
ggaggccctggcaccggtaagaccaccaccgtggtgcggttgctggctctgctgcaatcg
cccgccgtcgaagccggtcgcccgctgcgtattcgcctggcggcgccgaccggcaaggct
gcagcacgcctgaccgagtccatcggccaacaggtggagcgcctggcggtggccgctgat
gtacgccagaacattcctaccgatgtttccacggttcaccgtctgctcggcagtcgcccg
ggctcgcggcattttcgccaccatgctggcaaccccttgccgctggatgtgctggtggtc
gacgaagcgtcgatgatcgacctggaaatgatggccaacctgcttggcgccttgccgccc
catgcgcgcctggtgctgctgggtgacaaggaccagttggcttcggtcgaggccggtgcg
gtactcggtgacctgtgccgcgatgccgaagccgggcgttacagcccccagactcaggcc
tggctggagcaggtcagtggtgcccccctggtcggcagcgaactgctgcctggcactgtc
gatgagtatccgctggcgcagcaagtggtgatgctgcgcttttcgcggcgcttcggcgaa
ggcagcggcattggccagctggcgcgcctggtcaaccgccaggaggccgatcaggcccga
gccctgctcaaccagaagcaggacgatgtgtttgccctgagcctgcgcagtgaacaggac
cgcactttcgatcgcctgctgctcgaaggcctgggccgcggtagtgacgggccccagggt
tatcgcagctacctgcagaccctgcgccagcagcgcccgccactggccacgccggtggac
gatccgcgctgggaaacctgggccctgcaggtgctgcagggctttgaaaccttccagttg
ctgtgcgccgtgcgcaaggggccctggggtgtagaaggcttgaaccagcgggtcagccga
gtgcttggcggcgctgggttgatcgatagcgagcagccctggtacgaaggtcggccggta
ctgatgacccgtaacgattatggcttgggcctgatgaacggtgacgttggcatcgcccta
cgcctgcccgatgagcagcatgaagggcagcaggtactgcgtgtggcctttgcccgtaac
gatgggaaaggcggtgtgcggttcgttctgcccagtcggctcaacgaggtcgagacggta
tttgccatgaccgtgcacaagtcccagggctcagagttcacccacacggcgctggtgctg
cccgataccctcaatccggtgttgaccaaggaattgatctacaccggtatcacccgggcc
aagacctgttttagtttgatcgagccgcgcctgggtgtattcgaggacgcggtgcggcgt
aaggtcaaacgcatttcagggttgatgctggaacaggtatga
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