Pseudomonas tructae: EXN22_04845
Help
Entry
EXN22_04845 CDS
T07857
Name
(GenBank) hypothetical protein
Organism
ptk
Pseudomonas tructae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HCBP_related
HemolysinCabind
RTX_C
Motif
Other DBs
NCBI-ProteinID:
QBF25047
UniProt:
A0A411ME10
LinkDB
All DBs
Position
1070320..1078974
Genome browser
AA seq
2884 aa
AA seq
DB search
MMAKIFIESKSVAGTNFKHSYLVYQDDAGNETVIRGGPQSDNPFDFGEIDVKIDQPLESS
RDARGNDSPAERGQVELDLSGRNAAEVWQTLKTVAGQIQGSTTDYDMFGTNCNAVTRTLL
DAAGIPPTLPNNGGNYPGWDLNLPTYDTDGDGIPNTIDKDPFGPDTDADGIPDFKDLDDD
GDYIPDDYDLNPRGPGDLDGDGIPDDKDPDKDGDGIPNGVDPTPNGDAPPPPPPQTPPPA
PGSPLILDLDGDGVETSGLAAGIYFDHGGDGLRELTGFAAADDGLLALDLDGDGKITRGA
ELFGDQTLLADGSKARNGFQALARLDSNADGKVDSADSAFSSLRVWRDLNQNGVSDEGEL
YSLSQLGIQSLALKYTEQTQADAFGNEHRQVGSFTKDNGQQATMTDVWFVRNPSLVKEDL
LEVSAAIAQLPDAAGFGKVHSLHQAMVRDASGELQSLVGEFVGAQSRQQRQAVLEKLIFK
WTGQTGEYRNYYQSIIDARRIGALEAFYGDAIDLPRGSGQEYAAIFNGLFRDLVDTVFYQ
LASSTHLQPLFNQIGWVKDNGTGAWLGDFSRIIDDLVGVVQSDPARGQETLLDFIQAVRG
VNTGSGRNLELLRGALHGFIQGNDLTVYSSSAVAAVVATLTQGATSLTYRYGTSGDDTLS
LGESNDLVHGGRGNDTLAGGRGSDVYLFNLGDGQDRISDDNEYQSNNIVDTLRLGSGIFA
RDISVSRVGKDLLLSHSNGQDSITISNWFAQNSGRYQLERIEFADGQVWKSADLSAQVLR
FLGGSGDDVYTGVSADFSQILSGGAGNDILTAGAGEDLLRGGIGNDVLNGGAGADIYIYN
LGDGQDVIADDNFGNGNDKVDILRFGNSIAPADLAVSRSGLDLLLSHSNGVDRITVKNWF
ASNSGRYQLERIEFADNSVWTSAELNARLLQQLGGEGDDIITGVSADFVQSLNGGAGNDT
LTSGGGADRLEGGVGNDTLYGGSGSDLYLFNLGDGRDVLRDDSSFNGSDIDVLRFGAGIS
ADDIIVTRSGNHVLLSHRNGQDSVMIKDWFAAADGRYRLERIEFTDGTLWTSAMVSAPLL
VQNGTEGDDVLTGPGTGNQIINGLAGNDTLTASGGNDQLTGGTGNDVLYGGSGSDLYLFN
LGDGQDVLRDDSSYSSGNIDVLRFGAGIGPQDITVTRSGNHVIFSHGNGQDRISVQDWFS
TLDDRYKLERIEFADGTVWSSSMISTALLVISGSEADDVLVGPSTGNQTLNGLAGNDTLT
ASGGNDQLSGGTGNDRLYGGSGSDLYLFNLGDGQDVLRDDSSFASGNIDVLRFGQGISAD
DITISRSGNHVILSHRNGQDQVTVQDWFTSSDDRYKLERIEFADGSQWTSAYVTELSLAM
NGTADDDVLAGPSTGNQTIRGLAGNDRLTAGSGNDLLEGGLGNDTLDAGAGNDQLNGGSG
NDVLYGGSGSDLYLFNLGDGQDVLRDDSSFASGNIDVLRFGQGIGADDITISRSGNHVVF
SHRNGQDRITVQDWFTTSDDRYKLEWIEFADGSRWASAYVTELSLAMNGTVNDDVLTGPS
TGNQTLRGLAGNDSLTTGAGNDLLEGGLGNDTLTAGAGNDQLNGGTGNDVLYGGAGSDLY
LFNLGDGQDVLRDDSSFNSDNIDVLRFGEGIGADDISITRAGNHVVLSHRNGRDQITVQD
WFTSADSRYRLERIEFADGTVWTSAMVSAPLLLMTGDASDNLISGPSTGNQTLIGLAGND
TLTASGGADTLNGGTGNDKLYGGSGSDLYLFNLGDGQDLLRDDSSFNADNIDVLRFGEGI
GADDITITRSGNHVILSHRNGRDQITVQDWFTSVDGRYRLERIEFADGTVWTSAMISAPL
LVLSGEEGDDVLTGPSTGNQVLSGLAGNDTLTASGGNDQLSGGTGNDTLYGGSGSDLYLF
NLGDGQDILRDDSSYASGNIDVLRFGAGISANDISIGRSGNHVILSHRNGQDRITVQDWF
STGDDRHKLERIEFADGTVWSSALISTSLLVITGTAGDDVLVGPSTGNQTLSGLAGNDTL
TASGGNDQLSGGAGNDTLYGGSGSDLYLFNLGDGQDVLRDDSSFASGNIDVLRLGQGISA
DDISISRAGNHVILSHSNGQDRITVQDWFTSSDDRYKLERIEFADGTRWDSAYVTELSLA
MNGTANDDVLTGPSTGNQTIRGLAGNDSLTSGSGNDVLDGGLGNDTLTAGAGNDRLVGGA
GNDKLYGGTGSDLYLFNLGDGQDVLRDDTSFASGNIDVLRFGEGIAAQDIVTSRSGNHVI
FSHRNGQEQVTVQDWFTATDDRYKLERIEFADGTVWTSAMVSAPLLVTTGTEGNDVLLGA
STGNQTLSGLGGDDSLTSGADNDVLDGGLGNDTLTAGAGNDRLVGGAGNDKLFGGTGSDL
YLFNLGDGQDVLRDDTSFASGNSDVLRFGEGIAAQDILTSRSGNHVIFSHRNGQEQVTVQ
DWFTATDDRYKLERIEFADGTVWTSAMVSAPLLVTTGTEGNDVLVGASTGNQTLSGLGGD
DSLTSGADNDVLDGGLGNDTLTAGAGNDRLVGGAGNDKLYGGTGSDLYLFNLGDGQDVLR
DDTSFASGNSDVLRFGEGIAAQDIVTSRSGNHVIFSHRNGQEQVTVQDWFTATDDRYKLE
RIEFADGTVWTSAMVSAPLLVTTGTEGNDVLLGASTGNQTLSGLGGDDSLTSGADNDVLD
GGLGNDTLTAGAGNDRLVGGAGNDKLYGGTGSDLYLFNLGDGQDVLRDDTSFASGNIDVL
RFGEGIAAQDILTSRSGNHVIFSHRNGQEQVTVQDWFTTTDDRYKLERIEFADGTQWTSA
MVANFAVAPAGLRSSAAPGDALLDQQVHGLVAAMAAFAPEGGGFSLAAQDRPADLFVTVA
VNGQ
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgaagatatttatcgagtccaagtcagtcgcgggcactaatttcaagcacagc
taccttgtctatcaggatgacgctggcaatgagacggttatcagaggcgggccgcagagc
gataaccctttcgactttggcgagatcgacgtaaagattgaccagcctctggagtcttct
cgcgatgcccggggcaacgattctcctgccgagcgcggtcaggtcgaactggatctgagc
gggcgcaatgctgccgaggtttggcaaaccttgaagaccgtggctggccagattcagggc
agtaccaccgattacgacatgttcggaaccaattgcaatgcggtgaccagaaccctgctg
gacgccgccggtattcccccgaccttgcccaacaatggcggcaattatcccggctgggac
ttgaacctgccgacctacgataccgacggtgatggcattcccaacaccatcgacaaggac
ccttttggtccggataccgacgccgacggaattccggacttcaaggacctggatgacgat
ggtgactacattcccgatgattacgacctgaatccacgcggtccgggtgacctggatggc
gacggcatccccgatgacaaggaccccgacaaggatggtgatggtattcccaacggcgtc
gacccgacccccaatggtgacgcaccaccaccgccgccgccccagacccctccacctgct
cctgggtcaccgctgatcctcgaccttgatggtgacggtgtggaaaccagcggtttggcg
gcgggtatctactttgaccacggcggcgatggcctgcgtgaattgaccgggttcgccgcc
gctgatgacggcttgctggcgctggaccttgacggcgatggcaagattacccgtggcgcc
gagctgtttggcgatcagaccctgctggctgacggcagcaaggcacgcaacggttttcag
gcgcttgcccggctggacagcaacgcagatggcaaggtcgacagtgccgacagtgcgttc
agttcgctcagggtgtggcgtgacctcaatcagaacggtgtgtccgatgagggagagttg
tattcgctcagtcagttgggcatacagtcgctggcgttgaagtataccgagcagacgcag
gccgacgcctttggtaatgaacaccggcaagtgggcagttttaccaaggacaatggccag
caagcgaccatgaccgatgtctggtttgtgcgtaatccctcgttggtaaaagaagacctg
ctcgaggtcagtgcggccattgcgcaactgcccgatgccgcaggctttgggaaagttcac
tccttgcaccaggccatggtgcgtgacgcctcgggcgaactgcaaagtttggtgggcgag
tttgtcggcgcgcagtcccggcaacagcggcaagcagtgctcgaaaaactgatattcaaa
tggaccgggcaaaccggtgagtaccgtaactattaccagtccatcatcgatgcgcgtcgg
attggcgcgcttgaagcgttctatggtgatgcgatcgatctgccgcgaggttcggggcaa
gagtatgccgcgatattcaatgggctgttccgggaccttgtcgacacggtgttctatcag
ttggcgtccagcactcacctgcagccgctgttcaaccagattggctgggtaaaggacaac
ggtacaggtgcctggctcggtgatttcagtcggataatcgatgatcttgtcggggttgtg
caatcagaccctgcccgtgggcaggagacgttgcttgacttcattcaggcggtgcgtggc
gtgaacacgggcagcggcaggaacctggagttgctgcgcggtgccctgcacggctttatt
caaggcaacgacctcacggtgtattccagttcggcagtcgctgccgttgttgctacgttg
acccagggtgccacgtcattgacctaccgctacggcaccagtggtgacgacacgctcagc
ctgggggagagcaacgacctggtccacggcggccgtggcaatgacaccctcgccggtggt
cgtggttcggatgtctacctgttcaacctgggcgatggccaggaccggatcagcgatgac
aacgaatatcaaagtaacaacatcgtcgacaccctgcgcttgggcagcggcatttttgcc
cgggatatcagcgtcagccgcgtcggcaaggacttgctgctcagccatagcaatggccag
gacagcatcaccatcagcaactggtttgctcagaactccgggcgttatcagttggagcgc
atcgaattcgccgacggccaggtgtggaaaagcgccgacctcagtgcgcaggtgctgcgt
ttccttggaggctccggtgatgacgtctataccggcgtcagtgctgatttttcgcagata
ttgagtggcggagcaggtaacgacatcctgaccgcaggagccggtgaggacctgcttcgc
gggggcatcggcaatgatgtgctcaacggtggtgccggtgctgatatctacatctacaac
ctgggtgatggtcaggacgtcatcgccgatgacaatttcggcaatggcaacgacaaggtg
gacattctccggttcggcaacagcattgcgcctgccgacctggccgtcagccgctctggg
ctggatttgctgctcagccacagtaatggcgtggacaggatcacggtgaagaactggttt
gccagcaactctggccgttatcagttggagcggatcgagtttgccgacaactcggtctgg
accagcgccgagctcaatgcgcgattgctgcagcaactgggtggtgaaggagacgacatc
attaccggggtcagtgctgacttcgtacagtccctgaacggtggtgcgggcaacgatacc
ttgacctcgggaggcggcgccgatcgccttgaggggggcgtgggcaacgatacgctgtac
ggaggttcgggctctgacctgtacctgttcaacctgggtgatggccgggatgtactgcgt
gacgacagcagtttcaacggcagtgacatcgatgtgctgcgttttggcgccgggatcagc
gccgatgacatcatcgtcacccgatccggcaatcacgtgctgctcagccaccgcaacggc
caggacagcgtgatgatcaaggactggttcgctgccgcagatggccgctaccggttggag
cgaatcgagtttaccgatggcacgctgtggaccagtgccatggtgtctgcgccactgctg
gtgcagaacgggacagagggcgatgacgtgctcaccgggccgggtaccggtaaccagatt
attaacggtctggctggcaatgacacgctcacagccagcggcggcaacgaccagctcacc
ggcggtaccggcaacgatgtgctttacggtggctcggggtcggacctgtacctgttcaat
ctaggcgacggccaggatgtgttgcgcgacgacagtagctactcctcgggcaatatcgat
gtgttgcgcttcggcgccggtatcgggccgcaagacattaccgtcactcgctccggcaac
catgtgatcttcagccatggcaatggccaggaccggattagcgtgcaggactggttcagt
acccttgatgatcgctacaagctggaacgcatcgagtttgccgatggcacggtgtggagc
agcagcatgatttccactgcgttgctggtgatcagcggtagcgaagcagacgatgtactg
gtggggcccagcaccggcaaccagactctcaatggcctggctggcaacgatacgctcacc
gccagcggtggcaacgaccagctcagtggaggtaccggcaacgataggctttacggtggt
tcgggctcggacctgtacctgttcaacctgggcgatggtcaggatgtactgcgcgatgac
agtagtttcgcctccggcaacatcgatgtgttgcgtttcggccaaggcatcagcgccgac
gacatcaccatcagccgctccggcaaccatgtgatcctcagccaccgcaatggccaggac
caggtcaccgtgcaggattggttcacctccagtgatgatcgctacaagctggagcgcatc
gagttcgccgatggcagtcagtggaccagtgcctatgtcaccgaactgtctctggcgatg
aatggcacggctgatgatgatgtgctcgccggtcccagtaccggcaatcaaacgatacgc
gggctggccggcaatgaccgcctgacggcgggctcaggcaatgacctgcttgaaggcggg
ctgggcaacgatacgcttgacgcgggtgccggcaatgaccagctcaacggcgggagcggt
aatgatgtgctttacggcggctcgggctctgacctgtacctgttcaacctgggcgatggt
caggatgtgctgcgcgacgacagcagttttgcctccggtaacatcgatgtactgcgcttc
ggccaaggcatcggtgccgacgacatcaccatcagccgctccggcaaccatgtggtcttc
agtcatcgcaacggccaggaccggatcactgtgcaggactggttcaccaccagcgatgat
cgctacaaactggaatggatagagttcgccgatggtagccgctgggccagcgcctatgtc
accgagctgtccctggcgatgaacggcacggtcaatgatgatgtgctcaccggccccagt
actggcaatcaaaccttacgagggctggccggcaacgacagcctgaccacgggcgcaggc
aacgacctgttggagggtgggctgggcaacgacaccctcaccgcaggtgccggcaatgac
cagctcaatggcggcaccggcaacgatgtgctctacggtggcgcaggctctgacctgtac
ctgttcaacctgggcgatggccaggatgtgctgcgcgatgacagcagcttcaacagcgac
aatatcgatgtgctgcgttttggcgaaggcattggcgcagacgacatcagcataacccgc
gcgggcaatcatgtcgtgctcagccaccgcaacggccgggaccagatcacggtacaagac
tggttcacctctgccgacagtcgctaccgtctggagcggatcgagtttgccgatggcacg
gtgtggaccagcgccatggtgtctgcgccactgctgctgatgactggggatgcaagcgat
aacctgatcagcgggccgagtactggcaaccagaccctcatcgggcttgcgggcaatgac
accctcaccgccagcggtggggccgacacgctcaacggcggtaccggcaacgacaagctg
tacggtggctcaggctcggacttgtacctgttcaacctgggcgacggtcaggacctgctg
cgcgatgacagcagcttcaacgccgacaatatcgatgtactgcgtttcggcgaaggcatt
ggcgcggacgatatcaccatcactcgttctggcaatcatgtgatcctcagccaccgtaac
ggccgggatcagatcaccgttcaggactggttcacctctgtcgatggccgctaccggctg
gagcggatcgagtttgccgacggtacggtgtggaccagcgcgatgatctccgcgccattg
ttggtgctgagtggagaagaaggggatgacgttcttacgggtccgagcaccggtaaccag
gtcctcagtggcctggccggcaatgacacgctgaccgcaagcggcggtaacgaccaactc
agcggtgggactggcaacgatacgctctacggtggctcgggctcggacctgtacctgttc
aacctcggtgatggccaggatatcctgcgagacgacagcagctatgcctccggcaacatc
gatgtgctgcgcttcggcgcaggcatcagcgcgaacgacatcagcatcggccgctccggc
aaccatgtgatcctgagtcatcgcaacggccaggaccggattaccgtgcaggactggttc
agcaccggcgatgatcgccacaagctggaacgaattgaatttgccgatggcacggtgtgg
agcagtgccctgatctccacttcgctgctggtgatcaccggcacggctggcgatgatgtc
cttgtcgggccaagcaccggcaaccagacactcagtggcctggccggcaacgacacgctc
accgccagtggtggcaacgaccagctcagtggcggtgccggcaacgatacgctgtacggt
ggttcgggctcggacctgtacctgttcaacctgggcgacggccaggatgtactgcgcgat
gacagcagtttcgcctccggcaacatcgatgtgttgcgtttgggccaaggcatcagcgcc
gacgacatcagcatcagccgtgccggcaaccatgtgatcctcagccacagtaatggccag
gaccggatcaccgttcaggactggttcacctccagtgatgatcgctacaagctggagcgc
atcgagtttgccgatggcacccgctgggacagcgcctacgtcactgaactgtccctggcg
atgaatggtacggccaatgatgatgtgcttaccggtcccagtactggcaatcagacaatc
agagggctggccggcaatgacagcctgaccagcggctcgggtaatgacgtgctcgacggt
ggccttggcaatgacaccctcactgcgggggccggcaatgaccgtctggtcggtggtgcg
ggcaacgacaagctctacggcggcacgggttcggacctgtacctgttcaacctcggtgat
ggccaggatgtgctgcgcgatgacaccagctttgcgtcgggcaacattgatgtgctgcga
ttcggcgagggcatcgcggcgcaggacatcgtcaccagccgctccggcaaccacgtgatc
ttcagccatcgcaacggccaggagcaggtcaccgtgcaggactggttcactgccactgat
gatcgctacaagctggagcggatcgagttcgccgatggcacggtgtggacaagtgccatg
gtgtctgcgcccctgctggtgacgaccggcaccgagggcaacgacgtgctgttgggcgca
agtaccggcaaccagacgctcagtggtctggggggcgacgacagcctgacctcgggtgcg
gacaacgacgtgctcgacggtggccttggcaacgacaccctcactgcgggggccggcaat
gaccgtttggtcggtggtgcgggcaacgacaagttgtttggtggcacgggttcggacctg
tacctgttcaacctcggtgatggccaggatgtgctgcgcgatgacaccagctttgcgtcg
ggcaacagtgatgtgctgcgattcggcgagggcatcgctgcgcaggacatcctcaccagc
cgctccggcaaccacgtgatcttcagccatcgcaacggccaggagcaggtcaccgtgcag
gactggttcactgccactgatgatcgctacaagctggagcggatcgagttcgccgatggc
acggtgtggaccagtgccatggtgtctgcgcccttgctggtgacgaccggtaccgagggc
aacgacgtgctggttggcgcaagtaccggcaaccagacgctcagtggcctggggggcgac
gacagcctgacctcgggtgcggacaacgacgtgctcgacggtggccttggcaatgacacg
cttaccgcaggcgctggcaatgaccgcttggtcggtggtgcgggcaacgacaagctctac
ggcggcacgggttcggacctgtacctgttcaacctcggtgatggccaggatgtgctgcgt
gatgacaccagctttgcgtcgggcaacagtgatgtgctgcgattcggcgagggcatcgct
gcgcaggacatcgtcaccagccgctccggcaaccacgtgatcttcagccatcgcaatggc
caggagcaggtcaccgtgcaggactggttcactgccactgatgatcgctacaagctggag
cggatcgagtttgccgatggcacggtgtggacaagtgccatggtgtctgcgcccttgctg
gtgacgaccggtaccgaaggcaacgacgtgctgttgggcgcaagtaccggcaatcagacg
ctcagtggtctggggggcgacgacagcctgacctcgggtgcggacaacgacgtgctcgac
ggtggccttggcaatgacacgcttaccgcaggcgctggcaatgaccgcttggtcggtggt
gcgggcaacgacaagctctacggcggcacgggttcggacctgtacctgttcaacctcggt
gatggccaggatgtgctgcgcgatgacaccagctttgcgtcgggcaacattgatgtgctg
cgattcggcgagggcatcgcggcgcaggacatcctcaccagtcgctccggcaaccacgtg
atcttcagccatcgcaatggccaggagcaggtcaccgtgcaggattggttcacgaccact
gatgatcgctacaagctggagcggatcgagtttgccgatggtacgcagtggaccagcgcc
atggttgccaacttcgcagtagcacctgcggggttgcgtagcagcgccgcgcctggcgat
gcgctgctggaccaacaggtgcatggcctggtggccgccatggcggcctttgcgcccgag
ggcggcggcttttcactcgcggcgcaagaccggccggccgatctcttcgtgacggtcgct
gtaaacgggcaatga
DBGET
integrated database retrieval system
