Pseudomonas tructae: EXN22_05405
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Entry
EXN22_05405 CDS
T07857
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ptk
Pseudomonas tructae
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_05405 (phrB)
Enzymes [BR:
ptk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EXN22_05405 (phrB)
DNA repair and recombination proteins [BR:
ptk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EXN22_05405 (phrB)
Prokaryotic type
EXN22_05405 (phrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Microp_archaea
Motif
Other DBs
NCBI-ProteinID:
QBF25150
UniProt:
A0A411MEG8
LinkDB
All DBs
Position
complement(1197834..1199276)
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AA seq
480 aa
AA seq
DB search
MQLIWLRSDLRVLDNTALTAACERGPTLAVWLLSPSQWLAHDDAPCKVDFWLRNLQSLST
ALAQLNIPLLIRHADTWQQAPQVLLELCREHKVQGVHFNEEYGANESARDQAVSAHLEQA
GITTHTYLDQLLLHPGSILTRSGGYFQVFSQFRKACHERLHLSLPRLGHAPKAQASMAVA
SDPLPHQVPGFELPPQSLRDLWPAGEQEAQHRLQHFIDECATDYQTQRDFPAVAGTSQLS
AYLAAGVISPRQCLHAALSNNYGEFDSGNQGLTTWINELLWREFYKHILVGYPRVSKHRA
FRAQTQALPWRHAPDDLKAWQQGQTGIPIIDAAMRQLLATGWMHNRLRMVVAMFLSKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSASTGTDAAPYFRIFNPLSQSRRFDADGRFIR
QWVPELADLDAKKIHNPVITGDLFASKLYPQPIVDLGSSRQRALDAFQNLPTRQEQRAAS
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgatctggctgcgcagcgatttgcgcgtactcgacaacactgctctgacagcg
gcctgcgaacgcggcccgaccctggcagtatggctgctgagcccgagccaatggctggcc
catgacgatgcgccgtgcaaagtcgacttctggttgcgcaacctgcaaagcctgagcacg
gcactggcgcagttgaacatccccctgctgatccgccatgccgatacctggcaacaggcc
ccccaggtgctgcttgaactgtgccgggagcacaaggtgcagggcgtgcacttcaacgaa
gaatacggcgccaatgaaagcgcccgcgaccaggctgtcagtgcccacctggagcaggcc
ggcatcaccacccacacctacctggatcaattgctgttgcacccgggcagcatcctcacc
cgtagcggcggctactttcaggtgttcagccagtttcgcaaggcctgtcatgagcgcctg
cacctgagcctgccacgcctgggccatgcgcccaaggcgcaggcgtcaatggccgttgcc
agcgacccgctgccccaccaagtgcccggctttgagctaccgccccagtcactacgagac
ctctggcctgctggcgaacaggaggcgcaacaccgactgcagcatttcatcgatgaatgc
gccaccgactatcagacacaacgcgactttcccgctgtcgccggtaccagccagctctcg
gcgtacctggctgcaggggtgatttcaccgcgccagtgcctgcacgcggcattgagcaac
aactatggcgagttcgacagtggcaaccagggcctgacgacctggatcaacgagctgctc
tggcgcgaattctacaagcacatcctggttggctacccgcgcgtcagcaagcaccgtgcc
tttcgcgcacaaacccaagccctgccctggcgccacgcgccagacgatctcaaagcctgg
cagcaggggcaaaccggcatcccgatcatcgatgcagccatgcgccaactgctcgccact
ggctggatgcacaaccgcctgcgcatggtggtcgccatgttcctgagcaagaacctgctg
atcgactggcgtgaaggcgaacgctttttcatgcgtcacctcatcgacggcgacctcgcc
gccaacaacggtggctggcagtggagcgcatcgaccggcaccgatgccgcgccatacttc
cgcatcttcaatccgctcagccagtcacgacgctttgacgctgacggtcgcttcattcgg
caatgggtaccggagttggctgatctggatgcaaaaaaaatccacaatccagtgattact
ggcgatctttttgcttctaaactctatccacagcccattgtggacctcggtagcagtcgc
caacgtgcgttggatgcttttcagaatttacccacgcggcaggaacagagggcagcatcg
tga
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