Pseudomonas tructae: EXN22_06545
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Entry
EXN22_06545 CDS
T07857
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ptk
Pseudomonas tructae
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptk03032
]
EXN22_06545
03036 Chromosome and associated proteins [BR:
ptk03036
]
EXN22_06545
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_06545
DNA replication proteins [BR:
ptk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EXN22_06545
Chromosome and associated proteins [BR:
ptk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EXN22_06545
DNA repair and recombination proteins [BR:
ptk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EXN22_06545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QBF25366
UniProt:
A0A411MF01
LinkDB
All DBs
Position
1428666..1428947
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AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALEQLGQIVADQLENGSEITLPGIGKLKITERPAR
TGRNPSTGAAIEIAAKKVVKFVPAKVLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcattgaccaaagaccaactgatcgccgatatcgctgaagctatcgacgcgccaaaa
accaccgcgcgtaacgctctggagcaactgggtcagatcgttgctgatcaactggaaaat
ggcagcgaaatcaccctgccaggcatcggcaaactgaaaatcaccgagcgtcctgcccgt
accggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtcgtcaag
ttcgtaccagccaaagtgctgaccgacgctgtaaacaagtaa
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