Pseudomonas tructae: EXN22_07115
Help
Entry
EXN22_07115 CDS
T07857
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03410
Base excision repair
ptk03430
Mismatch repair
ptk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXN22_07115 (recJ)
03430 Mismatch repair
EXN22_07115 (recJ)
03440 Homologous recombination
EXN22_07115 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_07115 (recJ)
DNA repair and recombination proteins [BR:
ptk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
EXN22_07115 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EXN22_07115 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
EXN22_07115 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QBF25474
UniProt:
A0A411MFK2
LinkDB
All DBs
Position
1560934..1562643
Genome browser
AA seq
569 aa
AA seq
DB search
MRIDPRPLPSTLPFLGDLPPLLTRLYAARGVQSATELDKSLARLLPYQQLKGIEAAVDLL
VTALAERQRILIVGDFDADGATASTVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVEV
ALQRQPQLLITVDNGISSVEGVAAAKAAGLKVLVTDHHLPGHELPAADAIVNPNQPGCEF
PSKALAGVGVIFYVLMALRARLRSLGHYANAAQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVARRDHLRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLSDDANLAREMAGQLDELNQDRKSIEQGMQREALAQLKDLPLESMPFGLCLFEPDWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG
HAMAAGLSLPAENFPAFAQAFDEETRRQLREEDLTGRLLSDGTLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLVEQRVVGERHLKVVLKSECGTLKLDGIAFGIDREVWPNPTVR
WVELAYKLDVNEFRGQESVQLMIAHIEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatccccgcccgttgccgtccacgctgccatttcttggcgacctgccaccg
ttgctgacccgtctgtatgccgcccgtggcgtgcaatcggcaaccgagctggataaaagc
ctggcgcgcctgctgccttaccagcagctcaagggcattgaggctgcggtcgacctgctg
gtaacggcgctagcagaacgccagcgcatccttatcgtcggcgactttgatgctgacggt
gccacggccagcaccgtcggcgtgcttggcctgcgtctgctcggtgccgcccatgtcgac
tacctggtgcccaaccgcttcgagtacggctacggcctgacgccggagatcgtcgaggtg
gccctgcagcgccagccgcagttgctgatcaccgtcgacaacggcatctccagcgtcgaa
ggggtggccgcggccaaggcagcaggccttaaagtactggttaccgaccaccacttgccc
ggccatgaactgccggcagccgatgccatcgtcaaccccaaccagccgggctgcgagttc
ccgagcaaggcgctggccggcgtcggagtgattttctacgtgctgatggccttgcgcgcg
cgcttgcgcagcctgggccattacgccaacgcggcgcaaccgaacatcggtgaactgctt
gatctggtggccctgggcagcgttgccgacgtggtgccgctggatgccaacaaccgcatc
ctggtccatcagggccttgagcgaattcgtgccgggcgcgcgcggccggggctcaaggcc
attctggaggtggcccgccgcgatcacctgcgcatcacctccaccgatcttggctttatt
ctcggtccacggctcaacgccgccggtcgcctggacgacatgagcctgggcatcgagtgc
ctgctcagcgacgatgccaacctggcacgggaaatggccggtcagctcgacgaactgaac
caggaccgcaagtctatcgagcagggcatgcagcgcgaagccctggcccagctcaaggac
ctgccgctggaatcgatgccgttcggcctgtgcctgttcgagcccgactggcaccagggg
gtgatcggcatcctcgcctcgcgcctcaaagagcgttaccaccgcccgaccattgccttt
gccgatgcgggagagggcatgctcaagggttcggcacgttcggtaccgggctttcacatt
cgcgatgcactggacgccgtggcggcgcgtcatccgcaactgatcagcaaattcggtggg
catgccatggccgccgggctgtcgctaccggccgagaactttccggcgtttgcccaggcc
tttgacgaagaaacccgccgccagttgcgtgaagaagacctcaccggccgcctgctctcc
gacggaaccctggcggtcgaggagtttcacctggagctggcccgtgccttgcgccatgcc
gggccttggggccagcacttccccgaaccgttgttccacggcgtgttccaactggtcgag
cagcgggttgtcggtgagcggcacctgaaggtggtgctcaagagcgagtgcggtacgctc
aagctcgacggtattgcctttggcatcgaccgcgaagtctggcccaacccgacggtgcgc
tgggttgagctggcctacaagctcgacgtcaacgagtttcgcggccaggaaagcgtgcag
ttgatgatcgcgcatatcgagccgcgctga
DBGET
integrated database retrieval system
