Pseudomonas tructae: EXN22_07485
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Entry
EXN22_07485 CDS
T07857
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03030
DNA replication
ptk03430
Mismatch repair
ptk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXN22_07485
03430 Mismatch repair
EXN22_07485
03440 Homologous recombination
EXN22_07485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptk03032
]
EXN22_07485
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_07485
Enzymes [BR:
ptk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXN22_07485
DNA replication proteins [BR:
ptk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXN22_07485
DNA repair and recombination proteins [BR:
ptk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXN22_07485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
QBF25548
UniProt:
A0A411MFE4
LinkDB
All DBs
Position
1639797..1643318
Genome browser
AA seq
1173 aa
AA seq
DB search
MSATFVHLRLHTEFSLVDGLVRIKPLAKALAAMNMPAVAVTDQSNMCSLVKFYKNAMGAG
IKPICGADLWLANSDPDAPLSRICLLAMDAQGYRNLTELISRGWVDGQRNGLVIIERQWI
AEASEGLIALSAAKEGDIGMALLNGNPDEAQALLRDWMQMFPQRFYVEVQRTNRAGDEEY
LHAAVALADKLDAPLVATNDVRFIKQSDYDAHETRVCIGEGRALDDPRRSRNYSDQQYLK
SPEEMAELFSDLPEAIANTVEIAKRCNIQVQLGKHFLPDFPTPNGMGIDDYLRHVSHEGL
EERLAVLWPKETTPNYEEKRQVYLDRLKFELDIIIQMGFPGYFLIVMDFIKWAKNNGVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIEYV
ADAYGRNAVSQIITFGTMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLDKAYEQE
EILRDFLKTDEDAKEIWDMALKLEGVCRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMETINREQAKQGLDDLNIDFIPLDDKKTYE
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELAYPHSDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCASNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHH
PAPFMAAVLSADMHNTDKVVTLIEEVRSMKLRLDAPDVNTSDFKFTVNNDGRIVYGLGAI
KGVGEGPVEAIVEARAGGPFKDLFDFCERVDLKRINKRTLDALIRSGALDRLGPHFHDEL
KAYQANIDRNRAVLLAAMEEAIKAAEQTARTADSGHADLFGGLFVEEDADVYGNHRKARE
LTLKERLRGEKDTLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTVAGMIIALRVM
KNKKGDKMGFVTLDDRSGRIEASLFADAFMANQALLQTDAMVVVEGEVSNDDFSGGLRLR
VKRVMSMEDARTNLAESLRLKVHSDALKGDRLNWLGELFKRHRGACPITMEYTGSDAKAM
LQFGESWRIDPADGLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccactttcgttcatcttcgcctgcacaccgaattctcgctggtcgatggcctg
gtgcggatcaagccgctggccaaggcattggcggcgatgaacatgccggcggtcgcggtt
actgaccagagcaacatgtgctcgctggtcaagttctacaagaacgccatgggcgccggc
atcaagccgatctgcggcgccgacctgtggctggccaacagcgatccggatgcgccgttg
tcgcgtatctgcctgctggccatggatgcccagggctaccgcaacctgaccgaactgatt
tcccgtggctgggtcgatggccagcgcaatggcctggtgatcatcgagcgccagtggatt
gccgaggccagcgaaggcttgattgccttgtcggcggccaaggaaggcgacatcggcatg
gcgttgctcaacggcaacccggatgaagcccaagccttgctgcgcgactggatgcagatg
ttcccgcagcgcttctatgtcgaagttcagcgcaccaaccgcgccggtgacgaagaatac
ctgcatgccgccgtggccctggccgacaagctggacgcgccgctggtagccaccaacgat
gtgcgctttatcaagcagtccgactacgacgcccacgaaacccgcgtgtgcatcggtgaa
ggtcgggccctggacgacccgcggcgttcgcgcaactacagtgaccagcagtacctgaaa
agccccgaagaaatggccgagttgttcagtgacctgcccgaggcgattgccaacacggtt
gaaatcgccaagcgttgcaacatccaggtgcaattgggcaagcacttcctgccggacttc
ccgacgcccaacggcatgggcatcgatgactacctgcgccatgtctcccacgaaggcctg
gaagagcgtctggcggtactgtggccaaaagaaaccacgccaaattacgaagagaagcgt
caggtctacctcgaccggctgaagttcgagctggatatcatcatccagatgggcttcccc
ggttacttcctgatcgttatggacttcatcaagtgggccaagaacaatggtgtgccggtc
ggcccgggccggggttcgggtgccggctcgctggttgcctatgtcctgaagattaccgac
ctcgatccgctggcctatgacctgctgttcgaacgcttcctcaacccggaacgggtctcc
atgcccgacttcgacgtcgacttctgcatggacggccgcgaccgggtcatcgaatacgtg
gccgacgcctacggacgcaacgcggtgagccagatcatcacctttggcaccatggcggcc
aaggcggtggtgcgtgacgtcgcgcgggtgcagggcaaatcctacggcctggccgaccgc
ctgtcgaagatgatccccttcgaagtgggcatgaccctggacaaagcctacgagcaggaa
gagatcctgcgcgatttcctcaagaccgacgaggacgccaaggaaatctgggacatggcc
ctcaagctcgagggtgtctgtcgcggtaccggtaaacatgccggtggtgtggtgatcgcc
ccgaccaaactcaccgacttctcgccgatcgcctgtgatgaagagggcggcggcctggtc
acccagttcgacaaggatgacgtcgaggccgcgggcctggtgaagttcgacttcctcggc
ctgcggaccctgaccatcatcaagtgggcgatggaaaccatcaaccgcgagcaggccaag
caaggcctggacgacctgaatatcgacttcatcccgctggatgacaagaagacctacgaa
ctactgcaaaaagccgaaaccacggcggtgttccagcttgaatcgcggggcatgaaggag
ctgatcaagaagctcaagcctgactgcctggaagacctgatcgcactggtggcgttgttc
cgtcccggcccgctgcaatcgggcatggtggatgacttcatcaaccgcaagcacggtcgc
gccgaacttgcctacccgcattcggactaccagtacgaaggcctcaagccggttctggcg
ccgacctacggcatcatcctgtaccaggaacaggtgatgcagatcgcgcaggtcatggct
ggctacaccctcggtggtgcggacatgctgcgccgggccatgggtaagaaaaaacccgag
gaaatggccaagcaacgcggtggtttcatcgaaggttgtgccagcaacaatatcgatccg
gaccttgccggtaacattttcgacctggtagagaagttcgccggttacggcttcaacaaa
tctcactccgccgcttacggcctggtgtcctaccagaccgcctggctcaagacgcaccac
ccggcgccgttcatggcggcggtactgtcggcggatatgcacaacaccgacaaggtcgtg
accttgatcgaggaagtgcgcagcatgaagctgcgcctcgatgcgccggatgtgaatact
tccgacttcaagttcaccgtcaataacgatggccgcatcgtctatggcctgggtgcgatc
aagggcgtgggcgaggggccggtcgaggccatcgtcgaagcccgggcaggcggtccgttc
aaggatctgttcgacttctgcgagcgggtcgatctcaaacgtatcaacaagcgcaccctc
gacgcactgatccgcagtggcgcgctggaccgcctgggcccgcacttccacgacgagctc
aaggcctaccaggccaacatcgaccgcaatcgcgcggtgctgctggcggcgatggaagag
gcgatcaaggctgccgaacagaccgcgcgcaccgccgacagcggccacgccgacctgttt
ggcgggctgtttgtcgaagaggatgccgatgtctatggcaatcatcgcaaggcccgtgag
ctgacgctcaaagagcgcttgcgcggtgaaaaggacaccctggggctgtacctgaccggt
cacccgatcgatgagtacgaaggcgagatccgccgttttgcccgtcagcgcatcatcgat
ctcaagcctgcgcgcgatactcagaccgttgccgggatgatcatcgccctgcgcgtgatg
aagaacaagaagggcgacaagatgggcttcgtcaccctcgacgaccgttccgggcgcatc
gaggcgtcgctgttcgccgatgccttcatggccaaccaggcgctgctgcagaccgatgct
atggtggtggtggaaggcgaggtcagcaacgatgacttctctggcggcttgcgcctgcgg
gtcaaacgggtgatgagcatggaagatgcgcgcaccaatctggctgaaagcctgcgcctg
aaagtacacagcgacgccctcaagggcgatcggctgaattggctgggcgagctgttcaag
cgccatcgcggcgcctgcccgatcaccatggaatacaccggtagcgatgccaaggccatg
ttgcagttcggcgaaagctggcgtatcgaccctgccgatggcctgattcaggccctgcgt
gaccagttcggacgtgagaacgtctttttgcaatatcgatga
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integrated database retrieval system
