Pseudomonas tructae: EXN22_09190
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Entry
EXN22_09190 CDS
T07857
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
ptk
Pseudomonas tructae
Pathway
ptk02020
Two-component system
ptk02025
Biofilm formation - Pseudomonas aeruginosa
ptk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXN22_09190
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EXN22_09190
09142 Cell motility
02040 Flagellar assembly
EXN22_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptk03000
]
EXN22_09190
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ptk02035
]
EXN22_09190
Transcription factors [BR:
ptk03000
]
Prokaryotic type
Helix-turn-helix
Other families
EXN22_09190
Bacterial motility proteins [BR:
ptk02035
]
Flagellar system
Flagellar assembly proteins
Others
EXN22_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
bpMoxR
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QBF25859
UniProt:
A0A411MGS6
LinkDB
All DBs
Position
1987067..1988542
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSARRRDLAVVLNFLGEENLPCASHDWQQVVESLSSSREVLCVLIGTV
NAPASLLGLLKTVAGWDEFLPVLLLGEISSAELPDDLRRRVLSNLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLESMIEVGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHAPN
FASHAMLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRREGDEQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctcctgatcgatgacgatagcgctcgccgccgtgatctg
gcggtagtgttgaattttcttggcgaagaaaatctgccctgcgcaagccatgactggcag
caggttgtcgaatcgttgtcatccagtcgtgaagtactctgtgtcctgatcgggaccgtg
aatgctccggcaagtctgttgggcttgcttaagacagtggctgggtgggatgagttcctt
ccggttctgcttttgggcgaaatttcttctgccgagctgcctgacgacctgcgccgacgg
gtgctctccaacctcgagatgccgccgagctacagcaagttgctcgattcgctgcaccgt
gcccaggtctatcgcgagatgtacgaccaggcccgcgagcgcggccgccagcgcgagccc
aacctgttccgcagcctggttggcaccagccgggccatccagcatgttcggcagatgatg
cagcaggtggctgataccgacgccagcgtattgattcttggtgagtcgggtaccggtaag
gaagtggttgcgcgcaatctgcattaccattccaaacgtcgtgaagccccgttcgtgccg
gtcaactgcggcgcgatcccggccgagttgctcgagagcgagctgttcggtcacgagaag
ggcgctttcaccggcgccatcactagccgtgccgggcgtttcgaactggccaacggcggt
accctgttcctcgacgagatcggcgacatgccgttgccgatgcaagtcaagttgctgcgt
gtgctgcaggagcgcaccttcgagcgggttggcagcaacaagacccaaagcatcgatgtg
cgcatcatcgctgcgacccacaaaaacctcgaaagcatgatcgaggtgggtaccttccgc
gaagacctgtactaccgcctcaacgtattcccgatcgagatggccccgctgcgcgagcgc
gtcgaggacatcccgttgttgatgaacgagctgatctcgcgcatggagcacgagaagcgt
ggctcgatccgcttcaattcagcggcgatcatgtcgctgtgccgccatggctggccaggt
aacgttcgcgagttggccaacctggtcgagcgcatggcgatcatgcatccttacggggtg
attggcgtatcggaactgccgaagaagtttcgctatgtcgacgacgaagacgagcagttg
gtcgacagcctgcgatctgatctggaggagcgtgtggcaatcaatggtcatgcgccgaac
ttcgccagtcacgcgatgttgccgcccgaaggcctggacctcaaggactacctcggtggc
ctggagcagggtctgattcagcaggcgctggacgacgccaacggcatcgttgctcgtgct
gccgaacgcctgcgtatccgtcgtaccaccctggtcgagaaaatgcgcaagtacggcatg
agccgtcgcgaaggggatgagcaggcggaggattga
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