Pseudomonas tructae: EXN22_13260
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Entry
EXN22_13260 CDS
T07857
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EXN22_13260
09124 Replication and repair
03420 Nucleotide excision repair
EXN22_13260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptk03021
]
EXN22_13260
03036 Chromosome and associated proteins [BR:
ptk03036
]
EXN22_13260
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_13260
Enzymes [BR:
ptk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EXN22_13260
Transcription machinery [BR:
ptk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EXN22_13260
Chromosome and associated proteins [BR:
ptk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EXN22_13260
DNA repair and recombination proteins [BR:
ptk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EXN22_13260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QBF26613
UniProt:
A0A411MIF8
LinkDB
All DBs
Position
2883863..2886124
Genome browser
AA seq
753 aa
AA seq
DB search
MNYSVAVRALCEFSAKVGDLDLRFTPSPTAQEGISGHRRVMAGRGEGYETEVSLEGHYAT
LQVRGRADGYDPQLNRLEEIKTYRGDLARQPANHRQLHWAQAQVYGWLLCQQRKLSHLRL
ALVYLNVDNDEQTLIEARWSAEALEQFFNTQCALFLLWAEQQLQRQALRDQGLQALAFPH
GQFRQGQRELAETVYKAVSTGRCLMAQATTGIGKTLGTLFPLLKAIVPQQLDKIFFLSAK
TPGRALALEALQQVMATGTQGALRSLELVARDKSCEYPGTACHGDACPLAKGFYDRLPAA
RQSAQAMAVLDKAALREVALAHQVCPYYLGQEMARWVDVLVADYNYYFDQSALLYGLAQA
NQWRLAVLVDEAHNLVERARQMYSASLDQGQLLALRKLKPAGLVSALERLNRQWNALHKD
QIAPYRVVEGLPEALLKALQHCVSVIQEQLNQAPTGIDPAVLQFFFQALQFIRVSDLFDE
HFLFDISTRPGPGKRALSTLCLRNVVPAALIGPRMSAARSVTLFSATLSPQRYYTDLLGM
PADTAWLEVASPFAAEQLQVRLVSSVSTRYQHREASLAPIVELIAEQFGRVPGNYLAFFS
SFEYLQQVSNLLESRYPAIEQWRQAPGMDESQRQGFLERFVANGQGVGFAVLGGAFAEGI
DLPGTRLIGAFVATLGLPQVNPVNEQIKLRMARLFSAGFDYTYLYPGVQKVIQAAGRVIR
GTQDRGTLLLIDERFAEARVQRMFPAWWAPQQK
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaactacagcgtggcggttcgggcgttgtgcgagttcagcgccaaggtcggtgatctg
gacctgcgtttcaccccgtcgcccaccgcccaggagggcatcagcggccatcgacgggtc
atggccgggcgcggcgagggttatgaaacggaagtcagcctggaggggcattacgccacg
ctgcaggtgcgtggccgcgccgatggctatgatccgcagctcaatcgcctggaagaaatc
aagacctaccgtggcgacctggcccgccagcccgccaaccatcgccagctgcattgggcc
caggcccaggtgtacggctggttgctgtgccagcagcgcaagctttcgcacctgcgcctg
gcgctggtctacctgaatgtcgacaacgacgaacagacgctgattgaagcgcgttggagc
gccgaggcgctggagcagtttttcaatacgcaatgcgcactctttctgctctgggccgag
cagcagttgcagcgccaggccttgcgtgaccagggtttacaggccctggcattcccccat
gggcagtttcgccagggccagcgcgagctggccgaaaccgtgtacaaggcggtcagcacc
gggcgttgcctgatggcccaggccaccaccggcatcggcaagaccctcggtaccctgttc
ccgctgctcaaggccatagtcccacagcaactggacaagattttcttcctgagcgccaag
acccctgggcgtgccctggccctggaggcgctgcagcaggtgatggccacgggcacccag
ggcgcgctgcgcagcctggaactggttgcccgtgacaagtcctgtgaatacccgggcacg
gcctgtcatggcgacgcctgtccgctggccaagggcttttacgaccgactgcccgcagca
cgccagtccgcccaggcgatggcagtgctcgacaaggccgccttgcgcgaagtggctctg
gcccatcaggtctgcccgtattacctgggccaggaaatggcccgttgggtcgatgtgctg
gtggccgactacaactactactttgatcagagcgccttgctctatggcctggcccaggcc
aaccagtggcgcctggccgtgctggtggacgaagctcacaacctggtcgagcgggcccgg
cagatgtacagcgcaagcctcgaccagggccagttgctggccttgcgcaagctcaagccg
gcgggcctggtcagcgccctggagcgcctgaaccgccagtggaacgccctgcacaaagat
caaattgcgccgtaccgggtggtcgaaggtttgcctgaagccctgctcaaggcccttcag
cactgtgtttctgtgatccaggagcagctcaaccaggcgccgaccggcattgatcctgcg
gtgttgcagttcttctttcaggcattgcagttcatccgggtcagcgacctgttcgatgag
cattttctgttcgatatcagcacacgcccgggcccgggcaagcgggccttgtcgaccctg
tgcctgcgcaatgtggtgccggcggcgctgatcggcccgcgcatgagcgccgcgcgcagt
gtcacgctgttctccgccaccctcagcccgcaacgctactataccgacctgctgggtatg
ccagccgacacggcgtggcttgaggtcgcgtcgccttttgccgccgagcaactgcaagtg
cggctggtcagcagtgtctcgacccgttaccagcatcgcgaagcgtccctggcaccgatt
gtcgagctgattgccgagcaatttggccgcgtgccgggcaactacctggcgttcttcagc
agctttgaatacctgcaacaggtctcgaacctgttggaatcgcgttatccggctattgag
caatggcgtcaggcgccaggcatggatgaaagtcagcgtcagggctttcttgaacgattc
gttgccaacgggcagggcgtgggttttgccgtgctcggcggcgcctttgccgagggtatc
gacttgcccggcacgcgcttgatcggtgcctttgtcgccaccctcgggctgccccaggtc
aacccggtcaacgagcagatcaagctgcgcatggccaggctgttcagcgcaggtttcgac
tacacctacctgtatcccggggtgcagaaagtcatccaggcggcaggccgggtgatccgt
ggtacccaggaccggggcacgctgttgctgatcgatgagcgttttgccgaggcccgtgta
cagcgcatgtttccggcctggtgggcgccgcagcagaaataa
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