Pseudomonas tructae: EXN22_17050
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Entry
EXN22_17050 CDS
T07857
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptk
Pseudomonas tructae
Pathway
ptk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXN22_17050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptk03021
]
EXN22_17050
Transcription machinery [BR:
ptk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXN22_17050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_11
PhyR_sigma-like
HTH_29
HTH_28
Xre-like-HTH
DUF6362
HTH_Tnp_ISL3
HTH_24
HTH_7
RovC_DNA-bd
HTH_Tnp_4
HTH_40
HTH_36
TnsD
Motif
Other DBs
NCBI-ProteinID:
QBF27310
UniProt:
A0A411MKK5
LinkDB
All DBs
Position
complement(3747298..3747807)
Genome browser
AA seq
169 aa
AA seq
DB search
MSEAAGPTEQTLHGLYRQHRSWLEGWLYQRLGNRWDAADLSQDTFLRVLASPQVLSELRE
PRAYLLTVGKRLLVNFHKRRSLERAYLEALANLPEALVPSPEQRWLLLETLQALDELLDG
LPTAVRRAFLWAQLEGLNYAQIAERLAVSERTVKRYMAQAYEHCLLVAA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcggcgggccccaccgagcagaccttgcatggcctctatcggcagcatcgc
agctggctcgaaggttggttgtaccagcgcctgggcaaccgctgggatgccgccgacctc
agccaggatacgtttttgcgggtgctggccagcccccaggtgctcagcgagttgcgcgag
ccgcgggcctatctgctgaccgtgggcaagcgtttgctggtcaatttccacaagcgccgc
agcctggagcgtgcctacctcgaggccctggccaatctgcctgaagcattggtgccttcg
ccagagcagcgctggttgctgctggaaaccctgcaggctctggacgaactgctcgatgga
ttgccaacggcagtgcgtcgggcatttctctgggcgcagctcgagggtttgaactacgcg
cagatcgccgagcgcctggcggtcagcgagcgcacggtcaaacgctacatggcccaggcc
tatgagcattgcctgctggttgcggcatga
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