Pseudomonas tructae: EXN22_18915
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Entry
EXN22_18915 CDS
T07857
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk00071
Fatty acid degradation
ptk00280
Valine, leucine and isoleucine degradation
ptk00310
Lysine degradation
ptk00362
Benzoate degradation
ptk00380
Tryptophan metabolism
ptk00410
beta-Alanine metabolism
ptk00640
Propanoate metabolism
ptk00650
Butanoate metabolism
ptk00907
Pinene, camphor and geraniol degradation
ptk00930
Caprolactam degradation
ptk01100
Metabolic pathways
ptk01110
Biosynthesis of secondary metabolites
ptk01120
Microbial metabolism in diverse environments
ptk01200
Carbon metabolism
ptk01212
Fatty acid metabolism
Module
ptk_M00087
beta-Oxidation
ptk_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EXN22_18915 (fadB)
00650 Butanoate metabolism
EXN22_18915 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EXN22_18915 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EXN22_18915 (fadB)
00310 Lysine degradation
EXN22_18915 (fadB)
00380 Tryptophan metabolism
EXN22_18915 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EXN22_18915 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EXN22_18915 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EXN22_18915 (fadB)
00930 Caprolactam degradation
EXN22_18915 (fadB)
Enzymes [BR:
ptk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EXN22_18915 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EXN22_18915 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EXN22_18915 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EXN22_18915 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QBF27659
UniProt:
A0A411MLI5
LinkDB
All DBs
Position
complement(4147220..4149367)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLQANRIFSDFEDLGVPTVAAINGIALGGGLE
MCLAADYRVMASSAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVVPELLQAAALDLIQRAISGELDHKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDINESAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGIDFVRIDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDVLYEAKRLGQKNGKGFYAYETDKRGKP
KKVADAAVLEVLKPIVYEQREVSDEDIINWMMIPLCLETVRCLEDGIVDTAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtcttaccctgaacgaattg
cgtcaggccgtagacaccatcaaagccgacgcatcgatcaaaggcgtgattgtcagcagt
ggcaaggacgtgttcatcgtcggcgcggacatcaccgagtttgtcgataacttcaagctg
ccagaggccgaactggtcgccggcaacctgcaagccaaccggattttcagcgatttcgaa
gacctgggcgtgccgaccgttgctgcgatcaacggcatcgccctgggcggcggtctggaa
atgtgcctggctgccgactaccgcgtcatggccagcagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggcttcggcggtaccgtgcgcctgccacgcatcatcggt
gccgacaacgccatcgagtggattgccgccggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggcgccgtcgatgccgtggtggtgcctgagctgctgcaggcagctgccctggac
ctgattcagcgcgccatcagcggcgagctcgaccacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaacgccatcgagcagatgatgtcgttcgaaaccgccaaaggtttc
gttgccggtcaagctggcccgaactacccggcgccggtcgaagcgatcaagagcatccag
aaggccgccaacttcggtcgtgacaaggctctggaagtcgaagccgcaggtttcgccaag
ctggccaagacctcggttgccgaaagcctgatcggcctgttcctcaacgatcaggagctc
aagcgcaaagccaaggcccacgacgaaatcgctcacgacgtgaagcaggctgccgtactc
ggcgccggcatcatgggtggcggtatcgcctaccagtcggcggtcaagggcaccccaatc
ctgatgaaggacatcaacgaaagcgccatccagctgggcttgaacgaagcttccaagctg
ctcggcaagcgtgttgagaaaggccgcctgaccccggcgaaaatggctgaagcgctgaac
gcgattcgcccgaccctgtcctacggtgacttcgccaacgtcgacatcgttgtcgaagcc
gttgtcgagaacccgaaggtcaagcaggcggtgctggctgaagtcgaaggccaggtgaaa
gaagacgcgatcctggcgtcgaacacctcgaccatctccatcaacttgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagttatccgtggcgagaagtccagtgaagtggccgttgccaccaccgtggcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgttctgttcccgtacttcggcggtttcgccaagctggtcagcgccggtatcgac
ttcgtgcgcatcgacaagatcatggaaaaattcggctggccaatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccacggccgtgacgtcatggctgaaggcttc
ccggaccgcatgaaggacgatcgtcgctcggccatcgatgtgctctacgaagccaagcgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcgccgacgcggctgtcctcgaagtgctcaagccgatcgtctacgagcagcgc
gaagtcagcgacgaagacatcatcaactggatgatgatcccgctgtgcctggaaaccgtt
cgctgcctggaagacggcatcgtcgataccgccgccgaagccgacatgggcctggtctac
ggtattggtttccctcccttccgtggcggtgcgctgcgttacatcgactcgatcggtgta
gccgaattcgttgccctggccgacaaatacgccgatctgggtccgctgtatcaccccacc
gcgaagctgcgtgaaatggccaagaatggccagagcttcttcggttaa
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