Pseudomonas tructae: EXN22_19420
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Entry
EXN22_19420 CDS
T07857
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ptk
Pseudomonas tructae
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_19420 (sbcD)
DNA repair and recombination proteins [BR:
ptk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXN22_19420 (sbcD)
Archaeal homologous recombinant proteins
EXN22_19420 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QBF27753
UniProt:
A0A411MLT3
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All DBs
Position
4259108..4260349
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AA seq
413 aa
AA seq
DB search
MRLFHTSDWHLGQTLHGQERDFEHACFLDWLLGQLKLRQPDALLIAGDIFDTVNPPVKAQ
ERLYDFIVQAHEQQPKLNIVMIAGNHDSGSRIELPAPLMRRLRTHALGRVQWLDDGELDS
ERLLIPLTNAKGKVAAWCLALPFLRPAEVTGAHLGDDYLRGIAQVHEKLIAAALQRRKAG
QALIAVSHAHMAGGSISEDSERSLIIGNAEALPARLFAPEISYVALGHLHKPQKVNREAR
IRYSGSPIPLSFSEIGYPHQILEIELDGAQLASVESRLVPRAVHLQRLGPAPLAQVLEQL
AELPVVDLLDDPQRQPWLEIRVRLDEPLPDLRAQLEGALQGKAVRLVRIAAEYAGNGRSE
DDSSADLLELGQLTPNELFSRAWEQAYGNAVDEQSLADFALLLQDVQQEQEQP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttcacacctccgactggcacctgggtcagaccctgcacggccaggaacgc
gacttcgaacacgcctgttttctcgactggctgctcggccagctcaagctgcgccagccc
gacgccctgctgattgccggcgacattttcgacaccgtcaacccgccggtcaaagcccag
gaacggctctacgacttcatcgtccaggcccacgaacaacagcccaagctgaacatcgtg
atgatcgccggcaaccacgactccggttcacgcatcgaactgccggcgccgctgatgcgc
cgcctgcgcacccacgccctgggccgggtgcaatggctcgatgacggtgaactggacagc
gaacgcctgctgattccgctgaccaacgccaagggcaaggtcgccgcctggtgcctggca
ctgcccttcctgcgcccggcagaggtaaccggcgcgcacctgggcgacgactacctgcgt
ggtatcgcccaggtccacgaaaaactcatcgccgccgccctgcaacggcgcaaggccggc
caggcgctgattgccgtgagccacgcgcacatggccggtggttcgatctcggaagactcc
gagcgcagcctgatcatcggcaacgccgaagccctgccagcgcgcctgttcgccccagag
atcagctacgtcgccctcggccacctgcacaagccgcagaaggtcaaccgcgaagcgcgc
atccgctacagcggctcgccgatcccgctgtcgttctcggaaatcggctacccgcaccag
atccttgaaatcgagctggatggcgctcagctcgccagtgtcgagtcgcgcctggtaccg
cgcgccgtgcacttgcaacggctgggcccggcgccactggcccaagtgctcgaacaactg
gccgagttgccggtggtcgacctgctcgacgacccgcagcgccaaccctggctggagatc
cgcgtgcgcctggacgagccgctgcccgacctgcgcgcgcaacttgaaggcgccttgcag
ggcaaagctgtgcgcctggtgcgcatcgccgccgagtatgccggtaacggtcgcagcgaa
gacgacagcagcgccgacctgctggagctgggccaactcacccccaatgagctgttcagc
cgggcctgggaacaggcctacggcaacgccgtcgacgaacagagcctggccgactttgcc
ctgctgctgcaggacgtccagcaggagcaggaacagccatga
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