Pseudomonas tructae: EXN22_21855
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Entry
EXN22_21855 CDS
T07857
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EXN22_21855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptk03019
]
EXN22_21855
03009 Ribosome biogenesis [BR:
ptk03009
]
EXN22_21855
03036 Chromosome and associated proteins [BR:
ptk03036
]
EXN22_21855
Enzymes [BR:
ptk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
EXN22_21855
Messenger RNA biogenesis [BR:
ptk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EXN22_21855
Ribosome biogenesis [BR:
ptk03009
]
Eukaryotic type
90S particles
RNase
EXN22_21855
Prokaryotic type
rRNA processing factors
EXN22_21855
Chromosome and associated proteins [BR:
ptk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
EXN22_21855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QBF28201
UniProt:
A0A411MN29
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All DBs
Position
complement(4780544..4781233)
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKNQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSDMQTARERVLAWLAGEFESLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVTLLTEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttccttgagccgcctcgagcgtcagctgggctataccttcaagaaccaggag
ctgatgctgctggccctgacgcaccgcagttttgccgggcgtaacaatgaacgcctcgag
ttcctcggcgatgcgatcctcaactttgtcgccggcgaagcgctgttcgagcgtttcccc
caggcccgcgaaggtcagctgtcgcgtttgcgcgcacgcctggtcaagggtgagaccctg
gcggtactggcccgtggctttgacctgggcgactacctgcgtctgggctcgggcgagctc
aagagcggcggtttccgtcgcgagtcgatccttgccgatgccctggaggcgttgattggc
gccatctacctggactcggacatgcaaaccgcccgtgagcgggtgctggcctggttggcg
ggcgaattcgaaagcctgaccctggtcgataccaacaaggacccgaaaacccgtctgcag
gaattcttgcagtcgcgggcctgcgaactgccgcgctacgaagtggtggatattcaaggt
gaaccccattgccggacgtttttcgtcgaatgcgaagtgacccttttgactgaaaaaagc
cgagggcaaggcgtcagccggcgtatcgccgagcaagtcgcggccgccgcagcactgatc
gccctgggcgtggagaatggcaatgactga
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