KEGG   Pseudomonas tructae: EXN22_21855
Entry
EXN22_21855       CDS       T07857                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ptk  Pseudomonas tructae
Pathway
ptk03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptk00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    EXN22_21855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptk03019]
    EXN22_21855
   03009 Ribosome biogenesis [BR:ptk03009]
    EXN22_21855
   03036 Chromosome and associated proteins [BR:ptk03036]
    EXN22_21855
Enzymes [BR:ptk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     EXN22_21855
Messenger RNA biogenesis [BR:ptk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     EXN22_21855
Ribosome biogenesis [BR:ptk03009]
 Eukaryotic type
  90S particles
   RNase
    EXN22_21855
 Prokaryotic type
  rRNA processing factors
   EXN22_21855
Chromosome and associated proteins [BR:ptk03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     EXN22_21855
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DSRM_2
Other DBs
NCBI-ProteinID: QBF28201
UniProt: A0A411MN29
LinkDB
Position
complement(4780544..4781233)
AA seq 229 aa
MSVSLSRLERQLGYTFKNQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
QAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSDMQTARERVLAWLAGEFESLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQG
EPHCRTFFVECEVTLLTEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq 690 nt   +upstreamnt  +downstreamnt
gtgagcgtttccttgagccgcctcgagcgtcagctgggctataccttcaagaaccaggag
ctgatgctgctggccctgacgcaccgcagttttgccgggcgtaacaatgaacgcctcgag
ttcctcggcgatgcgatcctcaactttgtcgccggcgaagcgctgttcgagcgtttcccc
caggcccgcgaaggtcagctgtcgcgtttgcgcgcacgcctggtcaagggtgagaccctg
gcggtactggcccgtggctttgacctgggcgactacctgcgtctgggctcgggcgagctc
aagagcggcggtttccgtcgcgagtcgatccttgccgatgccctggaggcgttgattggc
gccatctacctggactcggacatgcaaaccgcccgtgagcgggtgctggcctggttggcg
ggcgaattcgaaagcctgaccctggtcgataccaacaaggacccgaaaacccgtctgcag
gaattcttgcagtcgcgggcctgcgaactgccgcgctacgaagtggtggatattcaaggt
gaaccccattgccggacgtttttcgtcgaatgcgaagtgacccttttgactgaaaaaagc
cgagggcaaggcgtcagccggcgtatcgccgagcaagtcgcggccgccgcagcactgatc
gccctgggcgtggagaatggcaatgactga

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