Pseudomonas tructae: EXN22_22335
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Entry
EXN22_22335 CDS
T07857
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
EXN22_22335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptk03400
]
EXN22_22335
Enzymes [BR:
ptk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
EXN22_22335
DNA repair and recombination proteins [BR:
ptk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
EXN22_22335
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXN22_22335
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXN22_22335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QBF28294
UniProt:
A0A411MN96
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All DBs
Position
complement(4889990..4891420)
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AA seq
476 aa
AA seq
DB search
MSSSIFWHDYETTGINPRNDRPLQVAGVRTDLDLNEIEAPINFYCQPSDDILPHPKACLV
TGITPAQLASRGLGEAEFMTRVHAELARPGTCGAGYNSLRFDDEVTRYSLYRNFFDPYAR
EWQGGNSRWDLIDIVRSAYALRPEGIVWPQQEGRTSLRLELLSAANGIDHGQAHEALSDV
RATIALARLIRQKQPKLYDWLFQLRSKQKVLDQIRLLQPMVHISGRFSAARNYLGVVLPL
AWHPRNRNALIVCDLHLDTRPLIDEDADSLRQRLYTRREEMPDGQLPVPLKLIHVNRCPV
VAPLGVLRPEDQQRLELDMAEYQQRAASLIAAAGQWQNKLPVIYSAEEFAPCDDPEQQLY
DGFLGDRDRRLCEQVRTVDPRQLGQGQWMFDDERLAELLFRYRARNFTETLTAEEHQRWQ
RFCQQRLSDPLMGAPNTIGDFERALEDCWAEADTGQQALLGQWREHVQRLKLRLAM
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
gtgagctccagcattttctggcacgactacgaaaccaccggtatcaatccgcgcaacgat
cgacccctgcaggtcgccggtgtgcgtactgacctggatctcaacgagatcgaggcgccg
atcaacttctattgccagcccagcgacgatatcctgccgcaccccaaggcatgtctggtc
accggcatcacgccggcgcaactggccagccgggggttgggcgaagccgagttcatgacc
cgcgtacatgccgagctggcgcgtccgggcacctgtggcgcgggctacaatagtttgcgt
ttcgacgatgaggtcacccgctacagcctgtaccgcaacttcttcgacccttatgcgcgc
gagtggcagggcggcaacagccgttgggacttgatcgatatcgttcgcagtgcttatgcg
ctgcgccctgaaggcattgtctggccgcaacaggagggccggaccagcctacgcctggag
ttgttgagtgcagcaaatggcatcgaccatggccaggcgcacgaggccttgtcggatgtg
cgggcaactattgcgcttgcacgattgatccgacagaagcagccaaagctctatgactgg
ttgtttcaactgcgcagcaagcagaaagtcctcgaccagatccgattattacaaccgatg
gtgcatatttccgggcgtttttcagctgcgcgcaattacttgggtgttgtattgcctttg
gcctggcacccgcgaaatcgcaatgccttgattgtctgtgatttgcatctcgatactcgg
ccgttgatcgacgaggacgctgattcactgcgtcagcgtttatacacccgccgtgaggaa
atgcctgacggacaattgccggtgccgctgaagttaattcatgtcaatcgctgtccggtg
gtcgcaccgctgggcgtattgcggcctgaagatcaacagcggctggaactggatatggct
gagtatcaacagcgagcggccagcctgatcgctgcggcagggcaatggcaaaacaaactg
ccggtcatttacagtgccgaggaatttgccccctgcgacgatccggaacagcagttgtat
gacggctttcttggtgatcgtgatcgtcgcctgtgcgaacaagtgcgcactgtcgatcca
cggcagttgggccagggtcaatggatgttcgatgatgagcgactggcggaactgttgttt
cgttaccgcgcgcgtaatttcaccgagaccttgactgccgaagagcaccagcgctggcaa
cgcttctgtcagcaacgcctgagcgatccgttgatgggcgcgcccaataccatcggcgac
ttcgagcgggcgcttgaggactgctgggcagaggccgataccggacaacaggcgttgctc
ggccagtggcgggaacatgtgcagaggttgaagttgcgattggcaatgtaa
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