Pseudomonas tructae: EXN22_22870
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Entry
EXN22_22870 CDS
T07857
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXN22_22870 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptk03019
]
EXN22_22870 (rhlB)
Enzymes [BR:
ptk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EXN22_22870 (rhlB)
Messenger RNA biogenesis [BR:
ptk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXN22_22870 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Ig_halo_2
DUF7464
Motif
Other DBs
NCBI-ProteinID:
QBF28397
UniProt:
A0A411MNR1
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All DBs
Position
5004162..5005601
Genome browser
AA seq
479 aa
AA seq
DB search
MTVLKALKKMFGKSEVEQLATETAAAATQPPVAAQAPAPSAPLKTEAATPAPVRAEKPAE
AKPRRERKPKPAASTWKLEDFVVEPQEGKTRFHDFKLSPELMHAIHDLGFPYCTPIQGQV
LGYTLRGKDAIGRAQTGTGKTAAFLISIITQLQQTPPPKERYMGEPRALIIAPTRELVVQ
IAKDAAALTKYTGLNVMTFVGGMDFDKQLKALEARHCDILVATPGRLLDFNQRGEAHLDM
VEVLVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNLAKQWTTDPAI
VEIEPENVASETVEQHVYAVAGSDKYKLLYNLVTENKWERVMVFANRKDEVRRIEERLVR
DGVNAAQLSGDVPQHKRIKTLENFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDPD
DYVHRIGRTGRAGTSGVSISFAGEDDSYQLPAIEELLGRKISCEMPPTELLKSVPRKHH
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaagatgttcggcaagagcgaggttgagcaactcgcc
accgaaaccgctgccgccgcgacgcagccgcccgtagccgcccaggcccctgccccgtcg
gcaccgctcaagactgaggccgcaacccctgccccggtccgtgccgagaagccggccgag
gccaagccacgccgtgagcgcaagccaaaacccgccgcctccacctggaagctggaagac
ttcgtggtcgagccgcaggaaggcaagacccgtttccatgacttcaagctctcgcccgag
ctgatgcatgcgatccacgacctgggctttccttactgcacgccgatccagggccaggtc
ctgggttacaccctgcgtggtaaagacgccatcggccgggcccagaccggtaccggcaag
accgcagccttcctgatttcgatcatcacccaactgcagcagaccccgccgcccaaagaa
cgctacatgggcgagccacgggcactgatcatcgcgccgacccgcgaactggtagtgcag
attgccaaggacgccgccgcgctgaccaagtacaccggcctcaacgtcatgaccttcgtc
ggcggcatggacttcgacaagcagctcaaggccctcgaagcccgtcattgcgacatcctg
gtcgccaccccgggccgcctgctggacttcaaccagcgcggtgaagcacacctggacatg
gtcgaagtattggtactggacgaagccgaccgcatgctcgacatgggcttcatcccccag
gtgcggcagatcatccgccagaccccgcccaagagcgaacgccagaccctgctgttctcg
gcaaccttcactgaagatgtgatgaacctggccaagcagtggaccacggaccctgcgatc
gtcgagatcgagccggagaacgtcgccagcgaaaccgtcgaacagcacgtctatgccgtg
gccggcagcgacaaatacaagctgctgtacaacctggtgaccgagaacaagtgggaacgg
gtgatggtctttgccaaccgcaaggacgaggtgcggcgcatcgaggaacggctggtgcgc
gacggcgtcaacgccgcccaactgtcgggcgacgtgccgcagcacaagcggatcaagacc
ctggaaaacttccgcgaagggcgcatcaccgtgctggtggccaccgacgtggcgggtcgc
ggcatccacatcgacggcatcagccacgtgatcaacttcaccctgcctgaagatccggac
gactacgtgcaccgcattggccgtacgggccgtgccggtaccagcggcgtgtcgatcagc
tttgccggtgaggatgactcctaccagttgccagccatcgaagagctgctgggacgcaag
atcagctgcgaaatgccgccgaccgagttgctcaagtcggtaccgcgcaagcatcactga
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