Pseudomonas tructae: EXN22_23805
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Entry
EXN22_23805 CDS
T07857
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ptk
Pseudomonas tructae
Pathway
ptk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXN22_23805 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptk03019
]
EXN22_23805 (pnp)
03016 Transfer RNA biogenesis [BR:
ptk03016
]
EXN22_23805 (pnp)
Enzymes [BR:
ptk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EXN22_23805 (pnp)
Messenger RNA biogenesis [BR:
ptk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EXN22_23805 (pnp)
Transfer RNA biogenesis [BR:
ptk03016
]
Prokaryotic type
tRNA degradation factors
EXN22_23805 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
TraK_C
OB_RRP5_4th
S1_2
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
QBF28560
UniProt:
A0A411MPG1
LinkDB
All DBs
Position
complement(5203778..5205883)
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDNDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDVAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQLAASSLDMVV
AGTSDAVLMVESEAKELTEDQMLGAVLFAHDEFQVVIQAVKELAAEAAKPTWDWTAKAEN
TSLLSAIRAELGEAVSQAYTITVKADRYARLGELRDQAIAKFSGEEGQPSASEVKEIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRSELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKDAAEAARQRVLSITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcaatcgaccgttaccctcgagacgggc
cgtattgctcgtcaagcgtccggcgccgtattggtcaccgtcgacaacgatgtcaccgta
ctggtgaccgtggtcggtgccaaacaggccgatccaggcaaaggcttcttccccctgtcc
gttcactatcaggaaaagacctacgccgccggcaagatccctggtggtttcttcaagcgt
gaaggccgtccttccgagaaagaaaccctgacctcgcgtctgatcgaccgtccgatccgt
ccgctgttcccagaaggcttcatgaacgaagtgcaggtggtctgcaccgtcgtttccacc
agcaagaagaccgatccggacgtcgctgcgatgatcggtacctcggctgccctggccatc
tccggcattccgttcgaaggcccgatcggcgccgcccgcgttgctttccatgaaagcacc
ggctacctgctgaacccgacctacgagcaactggctgcctcgagcctggacatggtcgtt
gccggtacctccgacgccgttctgatggtcgaatccgaagccaaagagctgaccgaagac
cagatgctgggcgccgtactgttcgcccacgacgaattccaggtcgtgatccaggctgtc
aaggaactggccgccgaagctgccaaacctacctgggactggactgccaaggccgagaac
acttcgctgctgagcgctatccgcgccgagctgggtgaagctgtttcccaggcttacacc
atcaccgtcaaggccgaccgttacgctcgcctgggtgaactgcgcgatcaggcgattgcc
aagttctccggtgaagaaggccagccttcggcttccgaagtcaaagaaatcttcggcgaa
atcgaataccgtaccgttcgcgaaaacatcgttaacggcaagccacgtatcgatggccgc
gacaccaagactgtgcgtccgctgaacatcgaagtcggtgttctgccaaagacccacggc
tcggcactgttcacccgtggcgaaacccaggccctggtcgttgcgaccctgggtactgcc
cgtgacgcgcaactgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccgccgttctcggtgggcgagtgtggccgcatgggcggtgctggtcgtcgc
gaaatcggtcacggccgtctggctcgccgttcggtccaggccatgctgcctgccgctgac
gtgttcccgtacaccatccgcgtagtatcggaaatcaccgagtccaacggttccagctcc
atggcttcggtctgtggtgcatccctggcactgatggacgctggtgtgccaatgaaggca
ccggtggccggtattgccatgggtctggttaaagaaggcgagaagttcgctgttctgacc
gacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aagggtgttaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcatcggtcagtcccgtagcgaactgtcggaaaacgctccgaccatgatcgccatgaag
atcgacaccgacaagatccgtgatgtcatcggtaaaggcggcgcgaccatccgtgccatc
tgtgaagaaaccaaggcttcgatcgatatcgaagacgacggttcgatcaagatcttcggt
gagaccaaagacgctgctgaagctgctcgtcagcgcgttctgagcatcactgccgaggct
gaaatcggcaagatctacgtcggcaaggtcgagcgtatcgtcgacttcggtgctttcgtc
aacatcctgcctggcaaggacggtctggttcacatctccatgctgagcgatgctcgcgtc
gagaaagtgaccgacatcctcaaagagggtcaggaagttgaagtactggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaggacgttgccgctgccaaggcatccggc
gtctaa
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