Pseudomonas tructae: EXN22_24005
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Entry
EXN22_24005 CDS
T07857
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ptk
Pseudomonas tructae
Pathway
ptk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ptk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EXN22_24005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptk03021
]
EXN22_24005
Transcription machinery [BR:
ptk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXN22_24005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_24
HTH_28
KORA
HTH_30
HTH_38
HTH_40
HTH_7
HTH_10
GerE
Motif
Other DBs
NCBI-ProteinID:
QBF28594
UniProt:
A0A411MP20
LinkDB
All DBs
Position
5247801..5248301
Genome browser
AA seq
166 aa
AA seq
DB search
MPAPDHAALHALYSEHNGWLKSWLRARLGNASDAADLAQDTFIRVLNARNADTIREPRSY
LGAIAHALMIDKFRRKALEQAYLDELALRPERLAESPESRLLILETLLAVDQMLDGLGER
TRNIFLAVQLEGLSYVATAERLGVSVTTVKKHLIRAMTHCLLLTDD
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccccgatcatgctgccctgcacgcgctctatagcgaacataacggttggttg
aaaagctggctacgtgcccgcctgggcaatgccagcgatgccgccgacctggcccaggac
acctttatccgggtgttgaatgcgcgcaatgccgacaccattcgtgaaccgcgcagctac
ctgggtgctatcgcccatgcgctgatgatcgacaaattccggcgcaaggcacttgaacag
gcttatctggacgaactggcactgcgcccggagcggctcgccgaatcgccggaaagccgt
ttgctgatcctcgaaacgctgctggcggtggaccagatgctcgatggcttgggcgagcgc
acccgtaatatcttcctggccgtgcagctcgaaggcctcagctatgtggccaccgccgaa
cgcctgggggtgtcggtgaccacagtgaagaagcacctgatccgtgccatgacccactgc
ctgctgctgacggacgactga
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integrated database retrieval system
