Purpureocillium takamizusanense: JDV02_003225
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Entry
JDV02_003225 CDS
T08929
Symbol
CLP1
Name
(RefSeq) Polynucleotide 5'-hydroxyl-kinase
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
JDV02_003225 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_003225 (CLP1)
Enzymes [BR:
ptkz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
JDV02_003225 (CLP1)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
JDV02_003225 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
AAA_16
nSTAND3
ATP_bind_1
Sigma54_activat
AAA_22
DUF815
ABC_tran
AAA_14
AAA_7
AAA_24
AAA_19
TsaE
AAA_28
SRP54
ORC-CDC6-like
PIF1
Motif
Other DBs
NCBI-GeneID:
72065185
NCBI-ProteinID:
XP_047840307
UniProt:
A0A9Q8QCS7
LinkDB
All DBs
Position
2:join(4745729..4745764,4745833..4746631,4746701..4746967,4747063..4747331)
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AA seq
456 aa
AA seq
DB search
MSIPGLGQIPTQTVTSSTRVVTLKPAWEWKFQVPVGRSLSLKILSGTAEKDGIELAPRNV
YNLPGGTASKILTWHGCELEIEGGSDNGSDSVAEYATPAANPANAHVNLHARLSELRAAA
AREGREGPRVLITGHRGTGKTALTRTLTSYATRQGEQPLTVNTDPRDGMLSLPGTLSAAV
FATVMDPEARDGWGGTPTSGPSVVPVKLPLVYFYGRADVEEEPDFYKALVGRLAGAVSGR
LSEDPDVRSAGVLVDGTGLSEDNAVGMDLLAHVVDELSINIVVVLGSTPLHAELGRRFSS
ERTSLGEPIQVVALDRSDGVVERDESFAEHIREQIIKEYFFGDAKRTLSPQIQQVDFDSL
IIYKVADDSAEAQGPDMLVREEPSSLMQHWTLAVMHAANKDPAETVRAASVMGFVYVSDV
DEERRKVKVLAPIGGRLGDRPLVWGRWPEPYMNLLG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcccagggctagggcaaataccgacgcagaccgtcacctcgtccacacgcgtc
gtcaccctcaagcccgcctgggaatggaaattccaggtgcctgtcggccgcagcctgtcg
ctcaagatcctctccggtaccgctgagaaggacggcatcgagctcgccccgcgaaacgtc
tacaacctccccggagggaccgcgtccaagatcctcacgtggcacggctgcgagctcgag
atcgaggggggctcggacaatggaagcgactctgtcgccgagtacgcgacaccggcggcg
aacccggcgaacgcacatgtgaacctacacgcgcgactcagcgagctacgcgccgccgct
gcgcgcgaggggagggagggcccccgcgtgctcatcacagggcatcgtggtaccggcaag
acggccctcacgcgcacgctgacgagctacgcgacgaggcagggcgagcagcccctgacg
gtcaacacggacccgcgcgacgggatgcttagtctgccggggaccctgagcgcggctgtc
ttcgcgacggtcatggacccggaggcaagggacggctggggcggcacgccgacgagcggg
cccagcgttgtgcccgtcaaattaccgctcgtctacttttacgggcgcgcggacgtagag
gaggagcccgacttttacaaggcgctcgtgggcaggctggccggcgcagtcagcgggcgg
ctgagcgaggatcccgacgtgcgcagcgcaggagtcttggtggatgggacggggttgagc
gaggataatgccgtcggcatggacttgctggcccacgtcgtcgacgagctttccatcaac
attgtcgtagtgcttggatcgactcctcttcatgctgaactgggcaggcgtttttcgagc
gagagaacgagcttgggcgagcccattcaggtggtagcattggaccgctcggacggcgtg
gtcgagcgtgacgaatccttcgccgagcacatccgagaacaaataatcaaggagtatttc
tttggcgacgcgaagcgtactctgagcccgcagatccagcaggtcgatttcgacagcctg
attatttacaaggtggctgacgattccgcagaggcgcagggcccggacatgctcgtgcgg
gaagagccgtcttctctgatgcagcactggacactggcggtgatgcatgccgccaacaag
gacccggcggaaacggttcgcgcagcgagcgtcatgggcttcgtgtatgtgtccgatgtg
gatgaggagcggcgcaaggtcaaggttttggcgccgattggaggcagattgggcgatagg
cccctcgtatggggtcggtggccggagccgtacatgaaccttttggggtag
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