Purpureocillium takamizusanense: JDV02_004032
Help
Entry
JDV02_004032 CDS
T08929
Symbol
RNA14
Name
(RefSeq) mRNA 3'-end-processing protein rna14
KO
K14408
cleavage stimulation factor subunit 3
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
JDV02_004032 (RNA14)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptkz03019
]
JDV02_004032 (RNA14)
Messenger RNA biogenesis [BR:
ptkz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
JDV02_004032 (RNA14)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_14
Motif
Other DBs
NCBI-GeneID:
72065988
NCBI-ProteinID:
XP_047841190
UniProt:
A0A9Q8QBQ0
LinkDB
All DBs
Position
3:join(1558831..1559433,1559489..1559920,1559973..1560987,1561033..1561943)
Genome browser
AA seq
986 aa
AA seq
DB search
MASEEVTWGEEGYDGAGDPQIEHSEEQVEDSAQDSHVPDDAAEDGEDQEDDADDGGDYDP
ESIAFETNAEPDKAASATPSQRPAASKPKMAGGFLVEVSDDDDDDDDDNNAQEGVSTPDH
GAAGNSSIKNGASPAPASGGPSHPPGMASLDPGALLEARIKEDPRGDMDAWLNLIADHKR
RGRLDNLRSTYGRFLDVFPQAADIWVEWIEMELGHDNFMEAERLFGKSLMTVLNVKLWTL
YLNYIRRRNDLTNDPTGQARRTVAQSYDFVIDNIGCDRDSGNIWQDYVNFVKSGPGQVGG
TGWQDQQKMDQLRKAYQRAINVPMLTVNNLWKEYDQFEMGLNKVTGRKFIQERSPGYMSA
KSANIALDNMMRTLKRTNLPRLPPAPGFDGDEDFRTQVEMWKKWIAWEKDDPLVLKDDEP
PAFRQRVLYCYKQALMALRFWPEIWVDAAAWCLENDVRDNDGKPVGTELLLQGIAANPES
VLLALKHADHIEKNYPEKEGDRSEYAKAVRQPFDTVLDTLYKMGDKVKEREKFEVSTLKQ
AALSEPPVHESIEDDEDDDEEAKKPKLSPTEQRILAIQNAYAAESQLLSRTISYVWIAMA
RAMRRIQGKGNQTEGGLRKVFTDARQKGRLTSDVYVAVALLESVVYKDPVGAKIFERGSR
LFPNDENFMIEYIKYLHARDDTTNARVVFETCANRLVSKPETLAKAKALYAYFHKYESQY
GELSQISKLEERMAELFPEDPKLSYFTARYSSDKFDPIAAPIIISKAVQMRPKQIVPIIE
RPPSVRNSVAPVRQEQSPRPQYVRATASPKRPFGIDEEELNPPKRLARGVSPLKGAAGRR
LDQQRRNQTSALHRDITFLLGIMPPAHSYDAPRLNATAMVSLLRDTQLPDYSTWRAKTGG
QYRPLPQGHARQTSGDYGNRPLSPYGRVASTAGGYRNSPLRTESGGAFATNPYAPPDGGA
PAVAWPPAAGGYGAPAGQYGGGYRFQ
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaagaggtgacatggggtgaggagggatatgatggtgcaggtgatcctcag
atcgagcatagcgaagaacaagtcgaagactccgcgcaagactcccacgtgccagatgat
gcggccgaagatggggaagaccaagaggacgacgcggacgatggcggggactacgatcca
gagtccattgcattcgaaacgaacgccgaaccagacaaggccgcttctgcaacaccatca
caacgaccggcagcgtccaaacccaagatggcgggcggctttctggtcgaggtctccgat
gatgatgatgatgacgacgacgacaataatgctcaggaaggcgtatcgacccccgaccat
ggagctgccgggaatagttcgatcaaaaatggcgcatccccggcacccgcgagcggcggc
ccatcccatccacctggcatggccagccttgaccctggcgcgcttctcgaagctcgcatt
aaagaggacccgcgtggagacatggatgcttggctgaacctcatagccgatcacaagcgc
agaggccggttagataaccttcgaagcacatatggcaggttcctggatgtgtttccccag
gctgccgacatttgggtggagtggattgagatggagctcggccacgacaatttcatggaa
gcagaacggttgttcggaaagagtctcatgaccgtgctgaacgtcaagctgtggacgctg
tacctcaactacattaggcgccgcaatgacctcaccaatgatcccaccggccaggcccgc
cgtaccgttgctcagtcgtacgactttgtcattgacaacattggatgcgaccgtgactct
ggtaacatctggcaagactatgtcaattttgtcaagagcgggcccggtcaggtcggtggc
actgggtggcaggatcagcagaagatggaccaacttcgaaaggcctaccagcgcgctatc
aacgtgcccatgttgacagtcaacaacttgtggaaggagtatgatcagtttgagatgggt
cttaataaagttacggggcgcaagtttatccaggaacgctcgccaggatacatgtccgca
aagagcgccaatattgccctggacaacatgatgcgcactctgaagcgcacgaatctgcca
cgactccctccagcgcctggattcgacggggacgaagacttcaggacccaggtcgaaatg
tggaagaagtggatagcgtgggagaaggacgaccccctggtcctcaaagatgatgaaccc
ccggctttcagacaaagggtgctctactgctataaacaagctctgatggctctccgattc
tggcctgaaatctgggttgacgcagccgcctggtgcctggaaaacgacgtgcgggacaac
gacggaaaaccagtaggcactgagctgctgctacagggcattgcggccaaccccgagagc
gttcttctggcgttgaaacatgcggaccatatcgagaagaattaccccgagaaagaaggg
gaccggtcagagtacgccaaggcagtgcggcagccttttgacacagtcctcgacacgctc
tacaagatgggcgacaaggtcaaggagcgtgagaagtttgaggtcagcacgcttaagcag
gcagccttgtcggaaccgccggtgcatgaatctatcgaggatgacgaggatgatgacgag
gaggcgaagaagcccaagttgtcaccaacggagcaacgcattctggctattcaaaacgca
tacgcggccgagtcccaactgctttctcgcaccatctcttacgtctggatcgccatggcc
cgtgccatgcgtcgcattcaaggcaaaggcaaccagaccgaaggcggcctgcgcaaggta
tttactgacgcccggcagaagggccgtctcaccagtgacgtctatgttgcggttgccctg
cttgaatctgtcgtgtacaaggaccctgtcggtgccaagattttcgagcgtggctcccgt
cttttcccgaatgatgagaacttcatgattgaatacatcaagtacctccacgcaagagac
gacacaacgaatgcgcgtgtcgtctttgaaacttgcgccaaccgtctggtatcgaaaccg
gagacgctcgccaaggcgaaggctctgtacgcttactttcacaaatacgagtcccagtac
ggcgaactctcgcagatctccaagctcgaagagaggatggccgaactctttcctgaggac
cccaagctgagctattttactgcccgatactcgtctgacaagttcgatcccattgcggcg
ccgatcatcatctccaaggcggtgcaaatgcgccccaagcagatcgttcccatcatcgag
cgcccgccctcggttcgcaacagtgtcgcacccgttcgacaggaacagagccctcggccg
cagtatgtacgagcgacggcgtcgccgaagcgaccctttgggattgacgaagaagagctt
aaccctcccaagcggcttgctagaggcgtgtctccgctcaagggtgctgcaggcagacgc
cttgaccagcagcgccgcaaccagacgtctgctctccaccgagacattacgttcctgctg
ggcatcatgccaccagcccacagctacgatgcgccgcgactaaacgcgacagccatggtg
tcgctgctccgcgacacgcagctgccggactacagcacctggcgggccaaaaccggtggg
caatatcgaccgttgccccagggtcacgcgaggcagacttcgggagattacggcaacagg
cctctaagcccgtatggacgcgtcgcgtctaccgccggtggctaccgcaactcacccctt
aggacggagagtggaggggcgttcgccacaaacccgtacgcgcctcctgacggcggagcg
ccggcggtggcctggccgccggcggcaggaggctatggcgcgcccgcgggacaatacggc
ggtggctatcgttttcagtga
DBGET
integrated database retrieval system
