Purpureocillium takamizusanense: JDV02_005069
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Entry
JDV02_005069 CDS
T08929
Symbol
SMD2
Name
(RefSeq) mRNA splicing protein
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ptkz
Purpureocillium takamizusanense
Pathway
ptkz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptkz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
JDV02_005069 (SMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptkz03041
]
JDV02_005069 (SMD2)
03032 DNA replication proteins [BR:
ptkz03032
]
JDV02_005069 (SMD2)
Spliceosome [BR:
ptkz03041
]
Complex A
U1 snRNP components
Sm proteins
JDV02_005069 (SMD2)
U2 snRNP components
JDV02_005069 (SMD2)
Complex B
U1 snRNP components
JDV02_005069 (SMD2)
U4/U6.U5 tri-snRNP components
JDV02_005069 (SMD2)
Complex C
U2 snRNP components
JDV02_005069 (SMD2)
DNA replication proteins [BR:
ptkz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
JDV02_005069 (SMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
EcoRII-C
Motif
Other DBs
NCBI-GeneID:
72067019
NCBI-ProteinID:
XP_047842304
UniProt:
A0A9Q8QFU5
LinkDB
All DBs
Position
4:complement(join(1343378..1343420,1343521..1343775,1343904..1343936,1343996..1344015))
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AA seq
116 aa
AA seq
DB search
MEDPKIKELLTKSRNELTEYEIAQLEEHEFSAGPLSILQTAVRERIQVLISIRNNRKLLA
RVKAFDRHCNMILENVKEMWTETSKTEGGMTKSVNKDRFISKMFLRGDSVILVLLA
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccccaagatcaaggaactcctcaccaagtcgcggaacgagctcaccgagtac
gagatcgcccagctcgaggagcacgagttctcggccgggcccctctccatcctccagacc
gccgtgcgcgagcgcatccaggtcctcatctccatccgaaacaatcgcaagctgctcgca
cgcgtcaaggccttcgaccggcactgcaacatgatcctcgagaacgtcaaggagatgtgg
accgagacgtccaagacggaaggcggcatgaccaagtcggtcaacaaggaccgcttcatc
agcaagatgttcctgcgaggcgatagcgtgattctggtgctgctcgcatag
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